Cluster: HRGMv2_4201_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4201
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4201_3 | HRGMv2_4201_3_19 | 16364 | 18319 | + | 3.A.16.1.1 |
| pfam | HRGMv2_4201_3 | HRGMv2_4201_3_20 | 18351 | 19235 | + | HSP33 |
| pfam | HRGMv2_4201_3 | HRGMv2_4201_3_21 | 19228 | 20193 | + | His_biosynth | His_biosynth | Dus |
| CAZyme | HRGMv2_4201_3 | HRGMv2_4201_3_22 | 20298 | 22124 | + | CBM48 | GH13_9 |
Gene ID: HRGMv2_4201_3_19
Type: TC
Location: 16364 - 18319 (+)
Type: TC
Location: 16364 - 18319 (+)
Gene ID: HRGMv2_4201_3_20
Type: pfam
Location: 18351 - 19235 (+)
Type: pfam
Location: 18351 - 19235 (+)
Gene ID: HRGMv2_4201_3_21
Type: pfam
Location: 19228 - 20193 (+)
Type: pfam
Location: 19228 - 20193 (+)
Gene ID: HRGMv2_4201_3_22
Type: CAZyme
Location: 20298 - 22124 (+)
Type: CAZyme
Location: 20298 - 22124 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.