Cluster: HRGMv2_4201_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4201
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4201_50 | HRGMv2_4201_50_4 | 5257 | 7092 | + | 4.A.1.2.11 |
| CAZyme | HRGMv2_4201_50 | HRGMv2_4201_50_5 | 7102 | 8514 | + | GH1 |
| pfam | HRGMv2_4201_50 | HRGMv2_4201_50_6 | 8533 | 9369 | + | PRD | PRD | CAT_RBD |
| TC | HRGMv2_4201_50 | HRGMv2_4201_50_7 | 9492 | 11366 | + | 3.A.16.1.2 |
Gene ID: HRGMv2_4201_50_4
Type: TC
Location: 5257 - 7092 (+)
Type: TC
Location: 5257 - 7092 (+)
Gene ID: HRGMv2_4201_50_5
Type: CAZyme
Location: 7102 - 8514 (+)
Type: CAZyme
Location: 7102 - 8514 (+)
Gene ID: HRGMv2_4201_50_6
Type: pfam
Location: 8533 - 9369 (+)
Type: pfam
Location: 8533 - 9369 (+)
Gene ID: HRGMv2_4201_50_7
Type: TC
Location: 9492 - 11366 (+)
Type: TC
Location: 9492 - 11366 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.