Cluster: HRGMv2_4201_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4201
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4201_49 | HRGMv2_4201_49_4 | 2859 | 3689 | + | 3.A.1.104.1 |
| TC | HRGMv2_4201_49 | HRGMv2_4201_49_5 | 3698 | 4516 | + | 3.A.1.104.2 |
| pfam | HRGMv2_4201_49 | HRGMv2_4201_49_6 | 4599 | 4985 | + | CTP_transf_like |
| CAZyme | HRGMv2_4201_49 | HRGMv2_4201_49_7 | 4987 | 7224 | + | GT2 |
Gene ID: HRGMv2_4201_49_4
Type: TC
Location: 2859 - 3689 (+)
Type: TC
Location: 2859 - 3689 (+)
Gene ID: HRGMv2_4201_49_5
Type: TC
Location: 3698 - 4516 (+)
Type: TC
Location: 3698 - 4516 (+)
Gene ID: HRGMv2_4201_49_6
Type: pfam
Location: 4599 - 4985 (+)
Type: pfam
Location: 4599 - 4985 (+)
Gene ID: HRGMv2_4201_49_7
Type: CAZyme
Location: 4987 - 7224 (+)
Type: CAZyme
Location: 4987 - 7224 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.