Cluster: HRGMv2_4201_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4201
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4201_35 | HRGMv2_4201_35_18 | 17293 | 17586 | - | 4.A.3.2.6 |
| CAZyme | HRGMv2_4201_35 | HRGMv2_4201_35_19 | 17605 | 18933 | - | GH4 |
| TF | HRGMv2_4201_35 | HRGMv2_4201_35_20 | 19013 | 20914 | - | HTH_11 |
| TC | HRGMv2_4201_35 | HRGMv2_4201_35_21 | 20916 | 22187 | - | 4.A.3.2.6 |
Gene ID: HRGMv2_4201_35_18
Type: TC
Location: 17293 - 17586 (-)
Type: TC
Location: 17293 - 17586 (-)
Gene ID: HRGMv2_4201_35_19
Type: CAZyme
Location: 17605 - 18933 (-)
Type: CAZyme
Location: 17605 - 18933 (-)
Gene ID: HRGMv2_4201_35_20
Type: TF
Location: 19013 - 20914 (-)
Type: TF
Location: 19013 - 20914 (-)
Gene ID: HRGMv2_4201_35_21
Type: TC
Location: 20916 - 22187 (-)
Type: TC
Location: 20916 - 22187 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.