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Cluster: HRGMv2_4190_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4190_11 HRGMv2_4190_11_10 18600 20000 + AA7
sulfatase HRGMv2_4190_11 HRGMv2_4190_11_11 19997 25420 + S3
TC HRGMv2_4190_11 HRGMv2_4190_11_12 25417 27183 + 3.A.1.21.1
TC HRGMv2_4190_11 HRGMv2_4190_11_13 27183 28910 + 3.A.1.21.1
TC HRGMv2_4190_11 HRGMv2_4190_11_14 29020 31176 + 1.B.14.1.10
TF HRGMv2_4190_11 HRGMv2_4190_11_15 31873 32790 + HTH_1
TF HRGMv2_4190_11 HRGMv2_4190_11_16 32897 33847 + HTH_1
TC HRGMv2_4190_11 HRGMv2_4190_11_17 34207 36102 + 4.A.1.2.2
TF HRGMv2_4190_11 HRGMv2_4190_11_18 36231 37256 + LacI
CAZyme HRGMv2_4190_11 HRGMv2_4190_11_19 37250 37804 - GT81
Gene ID: HRGMv2_4190_11_10
Type: CAZyme
Location: 18600 - 20000 (+)
Gene ID: HRGMv2_4190_11_11
Type: sulfatase
Location: 19997 - 25420 (+)
Gene ID: HRGMv2_4190_11_12
Type: TC
Location: 25417 - 27183 (+)
Gene ID: HRGMv2_4190_11_13
Type: TC
Location: 27183 - 28910 (+)
Gene ID: HRGMv2_4190_11_14
Type: TC
Location: 29020 - 31176 (+)
Gene ID: HRGMv2_4190_11_15
Type: TF
Location: 31873 - 32790 (+)
Gene ID: HRGMv2_4190_11_16
Type: TF
Location: 32897 - 33847 (+)
Gene ID: HRGMv2_4190_11_17
Type: TC
Location: 34207 - 36102 (+)
Gene ID: HRGMv2_4190_11_18
Type: TF
Location: 36231 - 37256 (+)
Gene ID: HRGMv2_4190_11_19
Type: CAZyme
Location: 37250 - 37804 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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