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Cluster: HRGMv2_4190_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4190_10 HRGMv2_4190_10_3 2168 2965 + 3.A.1.13.1
TC HRGMv2_4190_10 HRGMv2_4190_10_4 2985 3605 + 1.A.62.2.2
pfam HRGMv2_4190_10 HRGMv2_4190_10_5 3678 4022 - Fe-S_biosyn
TC HRGMv2_4190_10 HRGMv2_4190_10_6 4104 5552 - 2.A.49.5.5
pfam HRGMv2_4190_10 HRGMv2_4190_10_7 5746 7026 + Aminotran_3
TC HRGMv2_4190_10 HRGMv2_4190_10_8 7060 9042 - 3.A.1.14.3
TC HRGMv2_4190_10 HRGMv2_4190_10_9 9042 9935 - 3.A.1.14.3
TC HRGMv2_4190_10 HRGMv2_4190_10_10 9935 10732 - 3.A.1.14.3
CAZyme HRGMv2_4190_10 HRGMv2_4190_10_11 11054 13624 - GT51
Gene ID: HRGMv2_4190_10_3
Type: TC
Location: 2168 - 2965 (+)
Gene ID: HRGMv2_4190_10_4
Type: TC
Location: 2985 - 3605 (+)
Gene ID: HRGMv2_4190_10_5
Type: pfam
Location: 3678 - 4022 (-)
Gene ID: HRGMv2_4190_10_6
Type: TC
Location: 4104 - 5552 (-)
Gene ID: HRGMv2_4190_10_7
Type: pfam
Location: 5746 - 7026 (+)
Gene ID: HRGMv2_4190_10_8
Type: TC
Location: 7060 - 9042 (-)
Gene ID: HRGMv2_4190_10_9
Type: TC
Location: 9042 - 9935 (-)
Gene ID: HRGMv2_4190_10_10
Type: TC
Location: 9935 - 10732 (-)
Gene ID: HRGMv2_4190_10_11
Type: CAZyme
Location: 11054 - 13624 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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