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Cluster: HRGMv2_4190_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4190_25 HRGMv2_4190_25_1 119 1552 + GT5
CAZyme HRGMv2_4190_25 HRGMv2_4190_25_2 1573 4020 + GT35
STP HRGMv2_4190_25 HRGMv2_4190_25_3 4244 5767 - Pyr_redox_2
STP HRGMv2_4190_25 HRGMv2_4190_25_4 5984 6310 + Rhodanese
TC HRGMv2_4190_25 HRGMv2_4190_25_5 6385 7218 + 9.B.104.1.1
TF HRGMv2_4190_25 HRGMv2_4190_25_6 7242 8000 + HTH_DeoR
TF HRGMv2_4190_25 HRGMv2_4190_25_7 8067 10724 - GerE
CAZyme HRGMv2_4190_25 HRGMv2_4190_25_8 11383 13785 + GT35
CAZyme HRGMv2_4190_25 HRGMv2_4190_25_9 13797 15932 + GH77
Gene ID: HRGMv2_4190_25_1
Type: CAZyme
Location: 119 - 1552 (+)
Gene ID: HRGMv2_4190_25_2
Type: CAZyme
Location: 1573 - 4020 (+)
Gene ID: HRGMv2_4190_25_3
Type: STP
Location: 4244 - 5767 (-)
Gene ID: HRGMv2_4190_25_4
Type: STP
Location: 5984 - 6310 (+)
Gene ID: HRGMv2_4190_25_5
Type: TC
Location: 6385 - 7218 (+)
Gene ID: HRGMv2_4190_25_6
Type: TF
Location: 7242 - 8000 (+)
Gene ID: HRGMv2_4190_25_7
Type: TF
Location: 8067 - 10724 (-)
Gene ID: HRGMv2_4190_25_8
Type: CAZyme
Location: 11383 - 13785 (+)
Gene ID: HRGMv2_4190_25_9
Type: CAZyme
Location: 13797 - 15932 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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