dbCAN Logo

Cluster: HRGMv2_4190_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4190_19 HRGMv2_4190_19_10 9385 10371 + 3.A.1.14.2
TC HRGMv2_4190_19 HRGMv2_4190_19_11 10366 11625 - 2.A.1.38.1
TC HRGMv2_4190_19 HRGMv2_4190_19_12 11738 12745 + 3.A.1.14.2
TC HRGMv2_4190_19 HRGMv2_4190_19_13 12742 13734 + 3.A.1.14.2
TC HRGMv2_4190_19 HRGMv2_4190_19_14 13731 14531 + 3.A.1.14.2
TC HRGMv2_4190_19 HRGMv2_4190_19_15 14657 18601 - 2.A.1.42.2
pfam HRGMv2_4190_19 HRGMv2_4190_19_16 18601 18819 - MbtH
peptidase HRGMv2_4190_19 HRGMv2_4190_19_17 18838 20058 - S09.UPW
TC HRGMv2_4190_19 HRGMv2_4190_19_18 20316 22568 + 1.B.14.1.22
NULL(UNKNOWN) HRGMv2_4190_19 HRGMv2_4190_19_19 22713 22820 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4190_19 HRGMv2_4190_19_20 22801 23532 - 3.A.1.12.15
TC HRGMv2_4190_19 HRGMv2_4190_19_21 23516 24466 - 3.A.1.12.15
TC HRGMv2_4190_19 HRGMv2_4190_19_22 24453 25637 - 3.A.1.12.15
TC HRGMv2_4190_19 HRGMv2_4190_19_23 25643 26554 - 3.A.1.12.15
CAZyme HRGMv2_4190_19 HRGMv2_4190_19_24 26701 29004 - GH3
Gene ID: HRGMv2_4190_19_10
Type: TC
Location: 9385 - 10371 (+)
Gene ID: HRGMv2_4190_19_11
Type: TC
Location: 10366 - 11625 (-)
Gene ID: HRGMv2_4190_19_12
Type: TC
Location: 11738 - 12745 (+)
Gene ID: HRGMv2_4190_19_13
Type: TC
Location: 12742 - 13734 (+)
Gene ID: HRGMv2_4190_19_14
Type: TC
Location: 13731 - 14531 (+)
Gene ID: HRGMv2_4190_19_15
Type: TC
Location: 14657 - 18601 (-)
Gene ID: HRGMv2_4190_19_16
Type: pfam
Location: 18601 - 18819 (-)
Gene ID: HRGMv2_4190_19_17
Type: peptidase
Location: 18838 - 20058 (-)
Gene ID: HRGMv2_4190_19_18
Type: TC
Location: 20316 - 22568 (+)
Gene ID: HRGMv2_4190_19_19
Type:
Location: 22713 - 22820 (+)
Gene ID: HRGMv2_4190_19_20
Type: TC
Location: 22801 - 23532 (-)
Gene ID: HRGMv2_4190_19_21
Type: TC
Location: 23516 - 24466 (-)
Gene ID: HRGMv2_4190_19_22
Type: TC
Location: 24453 - 25637 (-)
Gene ID: HRGMv2_4190_19_23
Type: TC
Location: 25643 - 26554 (-)
Gene ID: HRGMv2_4190_19_24
Type: CAZyme
Location: 26701 - 29004 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List