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Cluster: HRGMv2_4189_CGC83

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_76 HRGMv2_4189_76_5 4195 5190 + 9.B.97.1.1
TC HRGMv2_4189_76 HRGMv2_4189_76_6 5183 5518 - 9.B.44.1.1
pfam HRGMv2_4189_76 HRGMv2_4189_76_7 5671 7125 - FGGY_N | FGGY_C
NULL(UNKNOWN) HRGMv2_4189_76 HRGMv2_4189_76_8 7199 8521 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4189_76 HRGMv2_4189_76_9 8881 9873 + 3.A.1.2.4
TC HRGMv2_4189_76 HRGMv2_4189_76_10 9957 11498 + 3.A.1.2.4
TC HRGMv2_4189_76 HRGMv2_4189_76_11 11476 12657 + 3.A.1.2.4
TF HRGMv2_4189_76 HRGMv2_4189_76_12 12728 13912 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_4189_76 HRGMv2_4189_76_13 13969 14538 - GH73
CAZyme HRGMv2_4189_76 HRGMv2_4189_76_14 15099 17135 + GH13_19
Gene ID: HRGMv2_4189_76_5
Type: TC
Location: 4195 - 5190 (+)
Gene ID: HRGMv2_4189_76_6
Type: TC
Location: 5183 - 5518 (-)
Gene ID: HRGMv2_4189_76_7
Type: pfam
Location: 5671 - 7125 (-)
Gene ID: HRGMv2_4189_76_8
Type:
Location: 7199 - 8521 (-)
Gene ID: HRGMv2_4189_76_9
Type: TC
Location: 8881 - 9873 (+)
Gene ID: HRGMv2_4189_76_10
Type: TC
Location: 9957 - 11498 (+)
Gene ID: HRGMv2_4189_76_11
Type: TC
Location: 11476 - 12657 (+)
Gene ID: HRGMv2_4189_76_12
Type: TF
Location: 12728 - 13912 (+)
Gene ID: HRGMv2_4189_76_13
Type: CAZyme
Location: 13969 - 14538 (-)
Gene ID: HRGMv2_4189_76_14
Type: CAZyme
Location: 15099 - 17135 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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