PROTEIN: HRGMv2_4189_76_8
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Protein File & Metadata
Source:
HRGMv2_4189_76_8.pdb
Genome ID:
Protein ID:
HRGMv2_4189_76_8
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Protein Sequence
MQAYFDQLDR VRFEGPKTEN PLAFRHYNPD ELVLGKRMED HLRFAACYWH TFCWNGADMF 60 GVGSFNRPWQ QPGEAIELAK RKADVAFEFF HKLNVPYYCF HDVDVSPEGA SLKEYLNNFA 120 QMVDVLAEKQ QQSGVKLLWG TANCFTNPRY GAGAATNPDP EVFSWAATQV FTAMNATHKL 180 GGENYVLWGG REGYETLLNT DLRQEREQIG RFMQMVVEHK HKIGFQGTLL IEPKPQEPTK 240 HQYDYDASTV YGFLKQFGLE KEIKLNIEAN HATLAGHSFH HEIATAIALG LFGSVDANRG 300 DAQLGWDTDQ FPNSVEENAL VMYEILKAGG FTTGGLNFDA KVRRQSTDKY DLFYGHIGAM 360 DTMALSLKVA ARMIEGGELD KRVAKRYAGW NGELGQQILK GQMSLQDLAK YAEQNQLAPQ 420 HQSGHQELLE GLVNHYLFDK 440
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZL90-F1-model_v4 | 1 | 440 | 1 | 440 | 0.9967 |
0.9995 |
| AF-P00944-F1-model_v4 | 1 | 440 | 1 | 440 | 0.9965 |
0.9994 |
| AF-A0A0H3H006-F1-model_v4 | 1 | 440 | 1 | 440 | 0.9965 |
0.9994 |
| AF-A0A0H3GR15-F1-model_v4 | 1 | 439 | 1 | 439 | 0.9942 |
0.9985 |
| AF-P44398-F1-model_v4 | 1 | 439 | 1 | 439 | 0.9934 |
0.9978 |
| AF-Q9FKK7-F1-model_v4 | 1 | 437 | 42 | 477 | 0.9301 |
0.9819 |
| AF-I1MSU1-F1-model_v4 | 1 | 437 | 45 | 480 | 0.9273 |
0.9819 |
| AF-Q8H3Q7-F1-model_v4 | 1 | 437 | 44 | 479 | 0.9238 |
0.9778 |
| AF-A0A1D6F3V1-F1-model_v4 | 1 | 437 | 47 | 493 | 0.9149 |
0.9789 |
| AF-A0A1D6ING2-F1-model_v4 | 1 | 437 | 49 | 494 | 0.9108 |
0.9758 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4R3KTZ7 | GH18 | 36 | 376 | 18 | 324 | 0.5169 |
0.6382 |
| AF-A0A4Y1RKU6-F1-model_v4 | GH18 | 36 | 440 | 23 | 400 | 0.4698 |
0.5452 |
| AF-A0A518GKZ6-F1-model_v4 | CBM48 , GH13 | 37 | 440 | 152 | 604 | 0.4457 |
0.5769 |
| AF-A0A097ER91-F1-model_v4 | GH18 | 15 | 364 | 384 | 819 | 0.3836 |
0.6069 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4R3KTZ7 | GH18 | 36 | 376 | 18 | 324 | 0.5169 |
0.6382 |
| V5XEY4 | GH39 | 38 | 424 | 8 | 583 | 0.4506 |
0.6028 |
| A0A097ER91 | GH18 | 15 | 364 | 384 | 819 | 0.3836 |
0.6069 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4xkm-assembly2.cif.gz_E | 2 | 437 | 1 | 435 | 0.9732 |
0.9846 |
| 6t8f-assembly1.cif.gz_D | 1 | 437 | 1 | 436 | 0.9709 |
0.9817 |
| 5nh4-assembly1.cif.gz_C | 1 | 437 | 1 | 436 | 0.9707 |
0.9815 |
| 1a0c-assembly1.cif.gz_A | 2 | 440 | 1 | 437 | 0.967 |
0.9774 |
| 1a0d-assembly1.cif.gz_A | 3 | 440 | 1 | 437 | 0.9629 |
0.9736 |
| 1a0e-assembly1.cif.gz_A | 2 | 440 | 1 | 440 | 0.9567 |
0.9699 |
| 6int-assembly1.cif.gz_B | 5 | 440 | 1 | 412 | 0.93 |
0.9685 |
| 1bxb-assembly1.cif.gz_D | 15 | 440 | 1 | 387 | 0.8379 |
0.9038 |
| 1bxc-assembly1.cif.gz_A | 15 | 440 | 1 | 387 | 0.837 |
0.9029 |
| 6n99-assembly1.cif.gz_D | 26 | 440 | 1 | 384 | 0.8369 |
0.9056 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q57IG0-F1-model_v4 | 1 | 440 | 1 | 440 | 0.9969 |
0.9997 |
| AF-C0Q1C2-F1-model_v4 | 1 | 440 | 1 | 440 | 0.9968 |
0.9997 |
| AF-A4W566-F1-model_v4 | 1 | 440 | 1 | 440 | 0.9968 |
0.9996 |
| AF-B5R4P8-F1-model_v4 | 1 | 440 | 1 | 440 | 0.9968 |
0.9996 |
| AF-A9MUV0-F1-model_v4 | 1 | 440 | 1 | 440 | 0.9968 |
0.9996 |
| AF-B5FLD6-F1-model_v4 | 1 | 440 | 1 | 440 | 0.9967 |
0.9996 |
| AF-B7L6Y0-F1-model_v4 | 1 | 440 | 1 | 440 | 0.9967 |
0.9996 |
| AF-B2U560-F1-model_v4 | 1 | 440 | 1 | 440 | 0.9967 |
0.9996 |
| AF-B4TZ55-F1-model_v4 | 1 | 440 | 1 | 440 | 0.9967 |
0.9995 |
| AF-Q8ZL90-F1-model_v4 | 1 | 440 | 1 | 440 | 0.9967 |
0.9995 |