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Cluster: HRGMv2_4186_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4186_37 HRGMv2_4186_37_7 7073 7735 - 1.A.14.2.1
TC HRGMv2_4186_37 HRGMv2_4186_37_8 8284 9513 - 2.A.1.11.3
TC HRGMv2_4186_37 HRGMv2_4186_37_9 9760 10995 - 2.A.27.1.1
NULL(UNKNOWN) HRGMv2_4186_37 HRGMv2_4186_37_10 11892 12263 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4186_37 HRGMv2_4186_37_11 12516 12755 + DUF2007
TC HRGMv2_4186_37 HRGMv2_4186_37_12 12722 15787 - 9.B.34.1.2
STP HRGMv2_4186_37 HRGMv2_4186_37_13 15880 16416 - SKI
pfam HRGMv2_4186_37 HRGMv2_4186_37_14 16696 17052 + DsrE
CAZyme HRGMv2_4186_37 HRGMv2_4186_37_15 17147 18364 - CE16
Gene ID: HRGMv2_4186_37_7
Type: TC
Location: 7073 - 7735 (-)
Gene ID: HRGMv2_4186_37_8
Type: TC
Location: 8284 - 9513 (-)
Gene ID: HRGMv2_4186_37_9
Type: TC
Location: 9760 - 10995 (-)
Gene ID: HRGMv2_4186_37_10
Type:
Location: 11892 - 12263 (-)
Gene ID: HRGMv2_4186_37_11
Type: pfam
Location: 12516 - 12755 (+)
Gene ID: HRGMv2_4186_37_12
Type: TC
Location: 12722 - 15787 (-)
Gene ID: HRGMv2_4186_37_13
Type: STP
Location: 15880 - 16416 (-)
Gene ID: HRGMv2_4186_37_14
Type: pfam
Location: 16696 - 17052 (+)
Gene ID: HRGMv2_4186_37_15
Type: CAZyme
Location: 17147 - 18364 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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