Cluster: HRGMv2_4154_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4154
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4154_49 | HRGMv2_4154_49_3 | 1675 | 2862 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_4154_49 | HRGMv2_4154_49_4 | 2859 | 4592 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4154_49 | HRGMv2_4154_49_5 | 4818 | 5267 | + | MOSC |
| TC | HRGMv2_4154_49 | HRGMv2_4154_49_6 | 5592 | 6344 | + | 3.A.1.8.2 |
| TC | HRGMv2_4154_49 | HRGMv2_4154_49_7 | 6341 | 7096 | + | 3.A.1.6.1 |
| STP | HRGMv2_4154_49 | HRGMv2_4154_49_8 | 7162 | 8154 | - | TOBE |
| TC | HRGMv2_4154_49 | HRGMv2_4154_49_9 | 8494 | 9261 | + | 3.A.1.8.1 |
Gene ID: HRGMv2_4154_49_3
Type: CAZyme
Location: 1675 - 2862 (+)
Type: CAZyme
Location: 1675 - 2862 (+)
Gene ID: HRGMv2_4154_49_4
Type:
Location: 2859 - 4592 (+)
Type:
Location: 2859 - 4592 (+)
Gene ID: HRGMv2_4154_49_5
Type: pfam
Location: 4818 - 5267 (+)
Type: pfam
Location: 4818 - 5267 (+)
Gene ID: HRGMv2_4154_49_6
Type: TC
Location: 5592 - 6344 (+)
Type: TC
Location: 5592 - 6344 (+)
Gene ID: HRGMv2_4154_49_7
Type: TC
Location: 6341 - 7096 (+)
Type: TC
Location: 6341 - 7096 (+)
Gene ID: HRGMv2_4154_49_8
Type: STP
Location: 7162 - 8154 (-)
Type: STP
Location: 7162 - 8154 (-)
Gene ID: HRGMv2_4154_49_9
Type: TC
Location: 8494 - 9261 (+)
Type: TC
Location: 8494 - 9261 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio intestinipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.