PROTEIN: HRGMv2_4154_49_4
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Protein File & Metadata
Source:
HRGMv2_4154_49_4.pdb
Genome ID:
Protein ID:
HRGMv2_4154_49_4
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Protein Sequence
MSLWPASTRP SMGTAGTGQD EKLSLAHLRC DVLFVLCAAL CSWASLQGIV DLSAAGVMLD 60 SDLGTYAQGM AARAHPECFV NDVVLKNVTH HNSIWNVQTA LATWLAPDGA YATGLLRSGA 120 VGIFFYLVFW YGLGRFLFVH PSLALLLVAF QCITCWVGWG TFWGVFMDDP VPRVWFAGLW 180 PLIVFGTLQA LPRPQLRPLV LLACGLSVWV HSISALTAGA MTFLAFFLAR DPKTSLARHL 240 GLCLTGLVCF LGPVFCFLWP TLSDEHVLSS ADLAVLSELF RLRYAADYHA PLATLGEFLH 300 TYLLQVPLIP LALAGLVLAV RRGSPRLKSL AGLSLPFVLA MALVVAFSFA EGLWARQQGH 360 MPLGHELVRG ARFLIPLCWL AIVAGFACVC ENRPMARRAT ALAAVAAVLV LAPDRQLLAG 420 LQTVHLSSLN VHSATMHDYA ERARLKEEAL AALQASTQPG DMVFCNVPEA AIRYRALRGL 480 VYSFKDGANA FYDRDPDRAR QWLHYTALFR AEPTGYVTAW LESGTLWLLT SRMEDRDLLE 540 RYGTIVYASE SPASGASASN GTASGTPGGW LLVRRVP 577
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CZ87-F1-model_v4 | 8 | 577 | 19 | 518 | 0.6191 |
0.6924 |
| AF-Q9NX78-F1-model_v4 | 6 | 573 | 6 | 596 | 0.5784 |
0.6584 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5S9F4H0-F1-model_v4 | GT83 | 28 | 577 | 1 | 478 | 0.6697 |
0.7538 |
| UYZ58515.1 | GT83 | 12 | 577 | 6 | 502 | 0.6646 |
0.7373 |
| AF-A0A7T5CJ27-F1-model_v4 | GT83 | 25 | 577 | 1 | 484 | 0.6581 |
0.7344 |
| A0A0W0Z9P3 | GT83 | 6 | 577 | 1 | 479 | 0.6547 |
0.7341 |
| AF-L0GV37-F1-model_v4 | GT83 | 27 | 577 | 9 | 494 | 0.6533 |
0.7342 |
| A0A0W0VXV4 | GT83 | 19 | 577 | 1 | 465 | 0.6501 |
0.7436 |
| AF-B9JNG6-F1-model_v4 | GT83 | 18 | 577 | 22 | 526 | 0.6452 |
0.7194 |
| B9JNG6 | GT83 | 18 | 577 | 22 | 526 | 0.6452 |
0.7194 |
| AF-K9ZJJ7-F1-model_v4 | GT83 | 11 | 577 | 7 | 535 | 0.6443 |
0.6953 |
| AF-K9Y0L9-F1-model_v4 | GT83 | 12 | 577 | 9 | 541 | 0.6441 |
0.693 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A518B1Q4 | GT83 | 12 | 577 | 1 | 485 | 0.6787 |
0.762 |
| A0A5S9F4H0 | GT83 | 28 | 577 | 1 | 478 | 0.6697 |
0.7538 |
| UYZ58515.1 | GT83 | 12 | 577 | 6 | 502 | 0.6646 |
0.7373 |
| A0A8D5JSU7 | GT83 | 22 | 577 | 1 | 489 | 0.6549 |
0.7277 |
| A0A0W0Z9P3 | GT83 | 6 | 577 | 1 | 479 | 0.6547 |
0.7341 |
| L0GV37 | GT83 | 27 | 577 | 9 | 494 | 0.6533 |
0.7342 |
| A0A0W0VXV4 | GT83 | 19 | 577 | 1 | 465 | 0.6501 |
0.7436 |
| F2QQQ7 | GT22 | 27 | 576 | 5 | 548 | 0.6466 |
0.6881 |
| B9JNG6 | GT83 | 18 | 577 | 22 | 526 | 0.6452 |
0.7194 |
| A0A6C2YNQ2 | GT83 | 12 | 577 | 11 | 503 | 0.6428 |
0.7192 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9NX78-F1-model_v4 | 6 | 573 | 6 | 596 | 0.5784 |
0.6584 |