Cluster: HRGMv2_4153_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4153
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4153_121 | HRGMv2_4153_121_2 | 649 | 1506 | - | 9.B.1.1.6 |
| peptidase | HRGMv2_4153_121 | HRGMv2_4153_121_3 | 2162 | 4090 | - | C44.001 |
| CAZyme | HRGMv2_4153_121 | HRGMv2_4153_121_4 | 4078 | 5394 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_4153_121 | HRGMv2_4153_121_5 | 5381 | 6502 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4153_121 | HRGMv2_4153_121_6 | 6499 | 7875 | - | GT4 |
Gene ID: HRGMv2_4153_121_2
Type: TC
Location: 649 - 1506 (-)
Type: TC
Location: 649 - 1506 (-)
Gene ID: HRGMv2_4153_121_3
Type: peptidase
Location: 2162 - 4090 (-)
Type: peptidase
Location: 2162 - 4090 (-)
Gene ID: HRGMv2_4153_121_4
Type: CAZyme
Location: 4078 - 5394 (-)
Type: CAZyme
Location: 4078 - 5394 (-)
Gene ID: HRGMv2_4153_121_5
Type:
Location: 5381 - 6502 (-)
Type:
Location: 5381 - 6502 (-)
Gene ID: HRGMv2_4153_121_6
Type: CAZyme
Location: 6499 - 7875 (-)
Type: CAZyme
Location: 6499 - 7875 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.