PROTEIN: HRGMv2_4153_121_5
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4153_121_5.pdb
Genome ID:
Protein ID:
HRGMv2_4153_121_5
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MSKPGPELFL VASLDVEEEG LFGGRYARRA PSVANTARLA QLEPLCAEGL RPTLFCAHSV 60 LTDPASCAML ARLRDRFGAE IGAHLHHWNT PPLTVESVAP TDAPTSAEYA VDAPPDPAEN 120 ADVAESVPAA GVPLPLMAAK LARLFKAGRD FQGAPLTSFR MGRWDLHRAH WPLLAQAGVL 180 CDASVRPLHC AARPSQGPDH FSAPFDPYWV SAGEKNIFEV PLTVTPLARP LPRLLRAMPG 240 KAGSAARAGL KTWGALALLP VYHPLWAMQA VTRLFVARGG RVLSLTWHSS EMMPGGAPHM 300 PDEAAVTRLL AKIQAWTTWL RGRWPVRSLS MHELRLELGP EAACPQPEKP CDWTTGEKKT 360 KEAQIQENPH DRA 373
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GXC6-F1-model_v4 | 5 | 342 | 1 | 320 | 0.788 |
0.861 |
| AF-A0A0D2DF04-F1-model_v4 | 4 | 356 | 1 | 302 | 0.6498 |
0.7312 |
| AF-A0A0D2FHJ4-F1-model_v4 | 4 | 356 | 1 | 300 | 0.6481 |
0.7316 |
| AF-O25080-F1-model_v4 | 4 | 360 | 1 | 293 | 0.6469 |
0.7365 |
| AF-A0A0D2GZ69-F1-model_v4 | 3 | 356 | 1 | 303 | 0.6466 |
0.7281 |
| AF-C0P192-F1-model_v4 | 3 | 368 | 1 | 304 | 0.6423 |
0.7295 |
| AF-C1GXQ0-F1-model_v4 | 3 | 368 | 1 | 304 | 0.6407 |
0.7285 |
| AF-K0EZL7-F1-model_v4 | 4 | 361 | 17 | 285 | 0.6396 |
0.7838 |
| AF-A0A0D2HM77-F1-model_v4 | 5 | 350 | 1 | 309 | 0.6318 |
0.7136 |
| AF-Q8ZM25-F1-model_v4 | 5 | 352 | 9 | 294 | 0.6301 |
0.7516 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| ULQ60020.1 | GH57 | 3 | 353 | 1 | 272 | 0.6354 |
0.7795 |
| AF-D7D8A9-F1-model_v4 | CE4 | 6 | 344 | 1 | 271 | 0.6002 |
0.7095 |
| AF-A0A7T7XPK8-F1-model_v4 | GH57 | 7 | 353 | 1 | 283 | 0.5951 |
0.8002 |
| AF-F4GIR8-F1-model_v4 | GH57 | 7 | 353 | 1 | 281 | 0.5923 |
0.7878 |
| BCQ47528.1 | GT9 | 5 | 343 | 1 | 321 | 0.5785 |
0.8651 |
| AF-A0A516TMV2-F1-model_v4 | GH57 | 5 | 353 | 1 | 289 | 0.5781 |
0.7479 |
| AF-B3DVN0-F1-model_v4 | GH57 | 4 | 353 | 1 | 289 | 0.5744 |
0.7519 |
| AF-A0A1W5LCV6-F1-model_v4 | GH57 | 4 | 353 | 1 | 289 | 0.5737 |
0.7509 |
| QTI78705.1 | GT4 | 5 | 364 | 413 | 735 | 0.5673 |
0.8672 |
| AF-D3RVC0-F1-model_v4 | GH57 | 3 | 353 | 1 | 294 | 0.5628 |
0.7411 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| ULQ60020.1 | GH57 | 3 | 353 | 1 | 272 | 0.6354 |
0.7795 |
| A0A1M6K3L2 | CE4 | 4 | 361 | 23 | 304 | 0.6263 |
0.7533 |
| A0A518WIP2 | CE4 | 4 | 355 | 27 | 312 | 0.6236 |
0.7499 |
| A0A142LIT0 | CE4 | 4 | 359 | 19 | 300 | 0.6228 |
0.7438 |
| A0A1P8UIT3 | CE4 | 4 | 364 | 27 | 303 | 0.6204 |
0.7583 |
| A0A4D7QKB1 | CE4 | 5 | 368 | 31 | 311 | 0.6201 |
0.7677 |
| A0A344PGC5 | CE4 | 4 | 361 | 22 | 304 | 0.6139 |
0.7416 |
| UAY05060.1 | CE4 | 4 | 350 | 26 | 314 | 0.6127 |
0.7414 |
| A0A1C6VME2 | CE4 | 4 | 359 | 22 | 306 | 0.6111 |
0.7385 |
| QVQ51379.1 | CE4 | 4 | 349 | 34 | 318 | 0.6037 |
0.7456 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3rxz-assembly1.cif.gz_B | 4 | 352 | 12 | 284 | 0.6655 |
0.7995 |
| 3qbu-assembly1.cif.gz_C | 5 | 359 | 1 | 290 | 0.6431 |
0.7353 |
| 8t0j-assembly1.cif.gz_A | 7 | 358 | 1 | 270 | 0.6348 |
0.7508 |
| 3lm3-assembly1.cif.gz_A | 6 | 355 | 7 | 397 | 0.5947 |
0.6913 |
| 7e1y-assembly1.cif.gz_D | 1 | 353 | 9 | 344 | 0.5146 |
0.6776 |
| 2b5d-assembly1.cif.gz_X | 6 | 353 | 1 | 400 | 0.4935 |
0.6202 |
| 1ufa-assembly1.cif.gz_A | 7 | 353 | 1 | 394 | 0.4856 |
0.6077 |
| 1k1w-assembly1.cif.gz_A | 8 | 353 | 1 | 254 | 0.4377 |
0.7837 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B5ZA76-F1-model_v4 | 4 | 361 | 1 | 293 | 0.6473 |
0.7369 |
| AF-O25080-F1-model_v4 | 4 | 360 | 1 | 293 | 0.6469 |
0.7365 |
| AF-Q6D2F2-F1-model_v4 | 7 | 357 | 1 | 297 | 0.6051 |
0.688 |
| AF-A8FRR1-F1-model_v4 | 1 | 356 | 1 | 297 | 0.6047 |
0.6957 |
| AF-Q3YZV0-F1-model_v4 | 7 | 358 | 1 | 294 | 0.6043 |
0.6915 |
| AF-B1IXT1-F1-model_v4 | 7 | 358 | 1 | 294 | 0.6043 |
0.6915 |
| AF-Q32DT2-F1-model_v4 | 7 | 358 | 1 | 294 | 0.6042 |
0.6914 |
| AF-Q8XDZ2-F1-model_v4 | 7 | 358 | 1 | 294 | 0.6041 |
0.6913 |
| AF-Q1R9F9-F1-model_v4 | 7 | 358 | 1 | 294 | 0.6041 |
0.6913 |
| AF-A8A2C3-F1-model_v4 | 7 | 358 | 1 | 294 | 0.604 |
0.6912 |