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Cluster: HRGMv2_4127_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4127_27 HRGMv2_4127_27_7 4860 6020 + CE9
TF HRGMv2_4127_27 HRGMv2_4127_27_8 6171 6938 - HTH_DeoR
TF HRGMv2_4127_27 HRGMv2_4127_27_9 6979 7743 - HTH_DeoR
TC HRGMv2_4127_27 HRGMv2_4127_27_10 8014 8454 + 4.A.6.1.10
TC HRGMv2_4127_27 HRGMv2_4127_27_11 8560 9036 + 4.A.6.1.9
TC HRGMv2_4127_27 HRGMv2_4127_27_12 9122 9943 + 4.A.6.1.9
TC HRGMv2_4127_27 HRGMv2_4127_27_13 9943 10773 + 4.A.6.1.9
Gene ID: HRGMv2_4127_27_7
Type: CAZyme
Location: 4860 - 6020 (+)
Gene ID: HRGMv2_4127_27_8
Type: TF
Location: 6171 - 6938 (-)
Gene ID: HRGMv2_4127_27_9
Type: TF
Location: 6979 - 7743 (-)
Gene ID: HRGMv2_4127_27_10
Type: TC
Location: 8014 - 8454 (+)
Gene ID: HRGMv2_4127_27_11
Type: TC
Location: 8560 - 9036 (+)
Gene ID: HRGMv2_4127_27_12
Type: TC
Location: 9122 - 9943 (+)
Gene ID: HRGMv2_4127_27_13
Type: TC
Location: 9943 - 10773 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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