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Cluster: HRGMv2_4127_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4127_11 HRGMv2_4127_11_7 6063 7514 - 9.A.40.2.1
TC HRGMv2_4127_11 HRGMv2_4127_11_8 8022 8846 - 1.C.113.1.10
NULL(UNKNOWN) HRGMv2_4127_11 HRGMv2_4127_11_9 9120 9284 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4127_11 HRGMv2_4127_11_10 9395 10882 - 4.A.1.2.6
pfam HRGMv2_4127_11 HRGMv2_4127_11_11 11139 11864 + Glucosamine_iso
NULL(UNKNOWN) HRGMv2_4127_11 HRGMv2_4127_11_12 12367 13437 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4127_11 HRGMv2_4127_11_13 13674 15671 - 2.A.16.2.2
TC HRGMv2_4127_11 HRGMv2_4127_11_14 15965 16972 + 2.A.115.1.5
CAZyme HRGMv2_4127_11 HRGMv2_4127_11_15 18697 22251 + CBM51 | GH110
Gene ID: HRGMv2_4127_11_7
Type: TC
Location: 6063 - 7514 (-)
Gene ID: HRGMv2_4127_11_8
Type: TC
Location: 8022 - 8846 (-)
Gene ID: HRGMv2_4127_11_9
Type:
Location: 9120 - 9284 (-)
Gene ID: HRGMv2_4127_11_10
Type: TC
Location: 9395 - 10882 (-)
Gene ID: HRGMv2_4127_11_11
Type: pfam
Location: 11139 - 11864 (+)
Gene ID: HRGMv2_4127_11_12
Type:
Location: 12367 - 13437 (+)
Gene ID: HRGMv2_4127_11_13
Type: TC
Location: 13674 - 15671 (-)
Gene ID: HRGMv2_4127_11_14
Type: TC
Location: 15965 - 16972 (+)
Gene ID: HRGMv2_4127_11_15
Type: CAZyme
Location: 18697 - 22251 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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