Cluster: HRGMv2_4125_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4125
- CGC Family ID: CGCFAM_05687
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4125_28 | HRGMv2_4125_28_11 | 9078 | 10526 | + | 2.A.1.3.50 |
| NULL(UNKNOWN) | HRGMv2_4125_28 | HRGMv2_4125_28_12 | 10562 | 11875 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_4125_28 | HRGMv2_4125_28_13 | 12138 | 13658 | + | Pyr_redox_2 |
| CAZyme | HRGMv2_4125_28 | HRGMv2_4125_28_14 | 13872 | 15167 | + | GH3 |
Gene ID: HRGMv2_4125_28_11
Type: TC
Location: 9078 - 10526 (+)
Type: TC
Location: 9078 - 10526 (+)
Gene ID: HRGMv2_4125_28_12
Type:
Location: 10562 - 11875 (-)
Type:
Location: 10562 - 11875 (-)
Gene ID: HRGMv2_4125_28_13
Type: STP
Location: 12138 - 13658 (+)
Type: STP
Location: 12138 - 13658 (+)
Gene ID: HRGMv2_4125_28_14
Type: CAZyme
Location: 13872 - 15167 (+)
Type: CAZyme
Location: 13872 - 15167 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Raoultibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.