PROTEIN: HRGMv2_4125_28_12
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Protein File & Metadata
Source:
HRGMv2_4125_28_12.pdb
Genome ID:
Protein ID:
HRGMv2_4125_28_12
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Protein Sequence
MTPEALTNEV VRRMVALLKD PQFCTLRTLA DEHPLPWAEF CRMRMPAGIT QEQTWDILNT 60 LRRQTAIELP FRDGDGRCGW FYPTRSILSD LDDIDRRCHE KSWLDLAIKS RNTTYFLIEE 120 HVDDAITSIR EDGLDIGYEK ARSVLLGERD PETETETLLL NGHRALWDLD EYVEKPCTPE 180 VILELFERVS QGVGDQTTPP LSHSSQVWKR KDLDTAAALS LAARLVEQHG VGRTEHPLLL 240 ALGIRHLIMS VLPLPAWNGI VSSLLMKLLF LKSNLPVLAF VPIIKACQEW ESGVLRPPAV 300 MATVGDSGMV VDDEVDYTVY MGVVTQLVRR RVDGVEEELR RVIERDEAFL RTVREDIEIN 360 HRQRTVLQIA LSNPESVFKI ESHQKTHRVA YATARADLMK LADLGFLQCI RTKRAFAYSV 420 PPNLRQLLKG SARKVQD 437
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FXX4-F1-model_v4 | 29 | 429 | 1 | 404 | 0.6575 |
0.7138 |
| AF-Q5F6Q0-F1-model_v4 | 72 | 420 | 11 | 351 | 0.6041 |
0.7202 |
| AF-K0ELK6-F1-model_v4 | 71 | 428 | 1 | 353 | 0.6004 |
0.7039 |
| AF-K0F6A7-F1-model_v4 | 64 | 419 | 1 | 377 | 0.5837 |
0.6949 |
| AF-Q9I5W2-F1-model_v4 | 72 | 431 | 7 | 354 | 0.5391 |
0.6357 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3eqx-assembly1.cif.gz_B | 69 | 420 | 7 | 346 | 0.6039 |
0.7175 |
| 3eqx-assembly1.cif.gz_A | 69 | 420 | 13 | 349 | 0.6011 |
0.7214 |
| 3zec-assembly1.cif.gz_A | 69 | 420 | 13 | 351 | 0.5999 |
0.7196 |
| 3zcn-assembly2.cif.gz_B | 69 | 420 | 13 | 351 | 0.5987 |
0.7175 |
| 7cb8-assembly1.cif.gz_A | 60 | 420 | 1 | 375 | 0.5806 |
0.6779 |
| 7cb8-assembly2.cif.gz_B | 63 | 420 | 1 | 374 | 0.576 |
0.6773 |
| 8cil-assembly1.cif.gz_B | 72 | 429 | 4 | 332 | 0.5438 |
0.6551 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9K0V1-F1-model_v4 | 72 | 420 | 11 | 351 | 0.6048 |
0.722 |
| AF-Q8E9K5-F1-model_v4 | 69 | 431 | 13 | 372 | 0.6012 |
0.6866 |