Cluster: HRGMv2_4108_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4108
- CGC Family ID: CGCFAM_00232
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4108_15 | HRGMv2_4108_15_16 | 15031 | 16167 | - | GH179 |
| STP | HRGMv2_4108_15 | HRGMv2_4108_15_17 | 16237 | 17931 | - | SBP_bac_1 |
| TC | HRGMv2_4108_15 | HRGMv2_4108_15_18 | 17998 | 18882 | - | 3.A.1.1.29 |
| TC | HRGMv2_4108_15 | HRGMv2_4108_15_19 | 18899 | 19855 | - | 3.A.1.1.29 |
| NULL(UNKNOWN) | HRGMv2_4108_15 | HRGMv2_4108_15_20 | 20139 | 21611 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_4108_15 | HRGMv2_4108_15_21 | 21700 | 22692 | + | LacI |
| TC | HRGMv2_4108_15 | HRGMv2_4108_15_22 | 23092 | 24885 | + | 3.A.1.120.5 |
Gene ID: HRGMv2_4108_15_16
Type: CAZyme
Location: 15031 - 16167 (-)
Type: CAZyme
Location: 15031 - 16167 (-)
Gene ID: HRGMv2_4108_15_17
Type: STP
Location: 16237 - 17931 (-)
Type: STP
Location: 16237 - 17931 (-)
Gene ID: HRGMv2_4108_15_18
Type: TC
Location: 17998 - 18882 (-)
Type: TC
Location: 17998 - 18882 (-)
Gene ID: HRGMv2_4108_15_19
Type: TC
Location: 18899 - 19855 (-)
Type: TC
Location: 18899 - 19855 (-)
Gene ID: HRGMv2_4108_15_20
Type:
Location: 20139 - 21611 (+)
Type:
Location: 20139 - 21611 (+)
Gene ID: HRGMv2_4108_15_21
Type: TF
Location: 21700 - 22692 (+)
Type: TF
Location: 21700 - 22692 (+)
Gene ID: HRGMv2_4108_15_22
Type: TC
Location: 23092 - 24885 (+)
Type: TC
Location: 23092 - 24885 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
UBA2862
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.