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PROTEIN: HRGMv2_4108_15_20

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4108_15_20.pdb
Genome ID:
HRGMv2_4108
Protein ID:
HRGMv2_4108_15_20

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Detailed structural information will appear here after analysis...

Protein Sequence 
MMSEIKIGWA   QTDITPDRPV   YNGGQIYPRI   SKYVHDPITA   TALALDNGEV   QAIMVSLDLM 60
CAPEPAVTDR   IRKGLADLEG   FDPKYLSLSV   THTHNSMHPK   PFLFDDRALE   WLGEERIHMP 120
DIPDNLLAGE   EMNDFLIDRV   IRVARQAWNG   RRKGGVSSAS   DYAAVAFNRR   PIFEDGNKTE 180
TIMYGVCARD   DFVRYEAGSD   HSADMIYTWS   ESGELTGVAI   CIPCPSQVFE   LHSFLTADYW 240
HYTRLALRER   LGNIFVLPLC   GAAGDQSPLD   LTRISKYNVR   ELEAWGAQAG   EVFRNFDMAD 300
ECRDIAMRIS   DAVMRGLSKA   RNCVETQPAF   CHVAQTLRLP   LRKVSESDYC   QARTQVEQAR 360
KTFSSDHPME   GLDLVRIFEP   MGIVGRYIQQ   NQDEYVNAPM   HFMRIGNASL   IMCPFELFIE 420
FSLRIKARAA   SLQTIVVQMT   DQYLDYLPTH   AAVAGGSYSS   APASTTCGPE   CGDTLVDQSL 480
SHIKAFWSVN 490
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A5K4ERM4-F1-model_v4 1 489 24 552 0.6849 0.7673
AF-O06769-F1-model_v4 4 489 1 494 0.6494 0.7475
AF-Q9I596-F1-model_v4 2 489 26 513 0.6411 0.7505
AF-Q54BK2-F1-model_v4 1 489 36 560 0.6396 0.7665
AF-Q9VA70-F1-model_v4 1 489 21 550 0.6391 0.7615
AF-A0A3Q0KPD2-F1-model_v4 1 489 23 552 0.6389 0.7681
AF-Q55G11-F1-model_v4 1 489 42 566 0.6386 0.7671
AF-K0EPA9-F1-model_v4 1 489 40 535 0.6381 0.7517
AF-Q5W7F1-F1-model_v4 1 490 56 580 0.6326 0.7679
AF-A0A0R0GS00-F1-model_v4 1 489 22 590 0.6312 0.7689
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A517MHD2-F1-model_v4 CE0 1 489 38 477 0.6117 0.8541
AF-A0A3G9EBB9-F1-model_v4 CE0 2 490 37 467 0.6094 0.8568
AF-A0A0H4PED2-F1-model_v4 CE0 2 490 28 458 0.6057 0.8518
AF-G0IWC7-F1-model_v4 CE0 3 490 27 457 0.6055 0.8507
AF-A0A1H2CQD8-F1-model_v4 GH13_23 3 490 1 439 0.5701 0.8412
AF-A0A1H2G217-F1-model_v4 GH13_23 3 490 1 418 0.5676 0.8716
A0A553JQQ1 CBM0 , CBM92 2 489 33 530 0.5559 0.746
A0A7S9KUB8 GT31 1 490 103 652 0.5238 0.7664
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1H2CQD8 GH13_23 3 490 1 439 0.5701 0.8412
A0A553JQQ1 CBM0 , CBM92 2 489 33 530 0.5559 0.746
A0A7S9KUB8 GT31 1 490 103 652 0.5238 0.7664
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4wgk-assembly2.cif.gz_B 2 489 1 522 0.6555 0.7683
4wgk-assembly1.cif.gz_A 3 489 1 521 0.6545 0.7679
2zws-assembly1.cif.gz_A 2 489 2 474 0.6512 0.7656
2zxc-assembly2.cif.gz_B 2 489 1 488 0.6486 0.7466
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O06769-F1-model_v4 4 489 1 494 0.6494 0.7475
AF-Q9I596-F1-model_v4 2 489 26 513 0.6411 0.7505
AF-Q29C43-F1-model_v4 1 489 21 550 0.6398 0.7623
AF-Q54BK2-F1-model_v4 1 489 36 560 0.6396 0.7665
AF-Q9VA70-F1-model_v4 1 489 21 550 0.6391 0.7615
AF-Q55G11-F1-model_v4 1 489 42 566 0.6386 0.7671
AF-Q5W7F1-F1-model_v4 1 490 56 580 0.6326 0.7679
AF-Q9JHE3-F1-model_v4 1 489 74 596 0.6269 0.7677
AF-Q91XT9-F1-model_v4 1 489 79 601 0.6256 0.768
AF-Q304B9-F1-model_v4 2 489 23 603 0.6249 0.7669
Download Full SwissProt Results