dbCAN Logo

Cluster: HRGMv2_4107_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4107_12 HRGMv2_4107_12_14 14999 16375 + 2.A.22.5.3
NULL(UNKNOWN) HRGMv2_4107_12 HRGMv2_4107_12_15 16799 18226 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4107_12 HRGMv2_4107_12_16 18280 19317 - CE2
pfam HRGMv2_4107_12 HRGMv2_4107_12_17 19465 19911 + LMWPc
NULL(UNKNOWN) HRGMv2_4107_12 HRGMv2_4107_12_18 20420 21121 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4107_12 HRGMv2_4107_12_19 21392 22342 + 3.A.1.1.10
NULL(UNKNOWN) HRGMv2_4107_12 HRGMv2_4107_12_20 22389 22562 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4107_12 HRGMv2_4107_12_21 22731 23621 + 3.A.1.1.10
Gene ID: HRGMv2_4107_12_14
Type: TC
Location: 14999 - 16375 (+)
Gene ID: HRGMv2_4107_12_15
Type:
Location: 16799 - 18226 (+)
Gene ID: HRGMv2_4107_12_16
Type: CAZyme
Location: 18280 - 19317 (-)
Gene ID: HRGMv2_4107_12_17
Type: pfam
Location: 19465 - 19911 (+)
Gene ID: HRGMv2_4107_12_18
Type:
Location: 20420 - 21121 (-)
Gene ID: HRGMv2_4107_12_19
Type: TC
Location: 21392 - 22342 (+)
Gene ID: HRGMv2_4107_12_20
Type:
Location: 22389 - 22562 (-)
Gene ID: HRGMv2_4107_12_21
Type: TC
Location: 22731 - 23621 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List