PROTEIN: HRGMv2_4107_12_15
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Protein File & Metadata
Source:
HRGMv2_4107_12_15.pdb
Genome ID:
Protein ID:
HRGMv2_4107_12_15
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Protein Sequence
MQTMEFTVHS DQIIRPWPRI EQYQNSTLRY TPPADFPAHW QRQNGRVKMI RVWVTLDEIW 60 NIEDDTYNWN YRIGVDRLGE KRYYPYDWPN TRPSDTLFED YLTSYCAMAD EAMLNIRRFE 120 RETADGVLSY EKYEAVCEKV IEHCCDLCKN IKWIEVSNES EIRGFGGLTV EEYMSLYNAV 180 CRAVNRLNAR RGWSLKVGGT AMTGSYATRG LWHEYMKALA EDTSPDRRID FYSFHSYNHD 240 VDCLQQLYSI HKSDVAKYNL PDAPVFFDEY GTCAATGVLT DSLQNACETL TGMLRGADLP 300 GMYVFPWCTF HNPNLQISYT QYVRLPDDTY APTPNGQAVH MLFGMLENEL RLECQRYIYD 360 QETGKLLRRE AAPFCSQPLF RARATGDTKR LYLIVTNPAD EPLTVNCHLS ALEGSRAEVV 420 IRQVDAAQNN AVTGPVCREL GVTETREIAI EEGESDLQCL LPPFGFACWS IQVLS 475
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q54J53-F1-model_v4 | 2 | 474 | 27 | 490 | 0.7343 |
0.7769 |
| AF-A0A1C1D129-F1-model_v4 | 1 | 475 | 2 | 537 | 0.7183 |
0.777 |
| AF-A0A0D2F6F9-F1-model_v4 | 1 | 474 | 2 | 539 | 0.7139 |
0.7756 |
| AF-U7PTQ8-F1-model_v4 | 3 | 473 | 1 | 491 | 0.6865 |
0.7225 |
| AF-A0A175VQD9-F1-model_v4 | 1 | 472 | 16 | 476 | 0.6848 |
0.726 |
| AF-A0A132ZAQ4-F1-model_v4 | 3 | 474 | 1 | 496 | 0.6831 |
0.7278 |
| AF-A0A132Z966-F1-model_v4 | 2 | 474 | 2 | 507 | 0.6809 |
0.7256 |
| AF-P48441-F1-model_v4 | 1 | 474 | 17 | 533 | 0.665 |
0.7728 |
| AF-Q6YGZ1-F1-model_v4 | 1 | 474 | 26 | 529 | 0.6647 |
0.7226 |
| AF-Q71RP1-F1-model_v4 | 1 | 474 | 27 | 530 | 0.6633 |
0.7217 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QYY36472.1 | GH0 | 1 | 474 | 8 | 461 | 0.8977 |
0.9343 |
| AF-A0A1C4VA07-F1-model_v4 | GH0 | 1 | 475 | 44 | 496 | 0.8167 |
0.8845 |
| AF-C6XSH3-F1-model_v4 | GH0 | 1 | 473 | 39 | 495 | 0.7996 |
0.8582 |
| AF-A0A191TLM7-F1-model_v4 | GH0 | 1 | 475 | 34 | 492 | 0.7869 |
0.839 |
| A0A2R4JWL3 | GH0 | 1 | 474 | 29 | 509 | 0.7795 |
0.8201 |
| AF-A0A6C0G0Q1-F1-model_v4 | GH39 | 1 | 475 | 8 | 460 | 0.7694 |
0.8094 |
| AF-A0A1H1R9L9-F1-model_v4 | GH39 | 1 | 475 | 9 | 468 | 0.7685 |
0.8026 |
| AF-A0A5B9WVY8-F1-model_v4 | GH39 | 1 | 472 | 21 | 461 | 0.7556 |
0.8156 |
| AF-A0A5B9WBK7-F1-model_v4 | GH39 | 1 | 475 | 22 | 476 | 0.7535 |
0.8005 |
| AF-A0A7S8EC28-F1-model_v4 | GH39 | 1 | 475 | 8 | 474 | 0.7522 |
0.7805 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0G4AZF8 | GH39 | 1 | 474 | 19 | 443 | 0.7809 |
0.8545 |
| A0A1H1R9L9 | GH39 | 1 | 475 | 9 | 468 | 0.7685 |
0.8026 |
| W0J6C5 | GH39 | 1 | 475 | 29 | 462 | 0.765 |
0.84 |
| A0A8J8MK37 | GH39 | 3 | 474 | 1 | 483 | 0.7615 |
0.7868 |
| A0A5B9WVY8 | GH39 | 1 | 472 | 21 | 461 | 0.7556 |
0.8156 |
| A0A5B9WBK7 | GH39 | 1 | 475 | 22 | 476 | 0.7535 |
0.8005 |
| A0A7S8EC28 | GH39 | 1 | 475 | 8 | 474 | 0.7522 |
0.7805 |
| A0A857NGA1 | GH39 | 1 | 473 | 27 | 449 | 0.7476 |
0.8293 |
| A0A4U7JJ76 | GH39 | 1 | 475 | 1 | 489 | 0.7454 |
0.7822 |
| WCJ57950.1 | GH39 | 1 | 474 | 34 | 486 | 0.7445 |
0.8008 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2bfg-assembly2.cif.gz_H | 4 | 475 | 1 | 483 | 0.749 |
0.7863 |
| 2bs9-assembly2.cif.gz_E | 4 | 475 | 1 | 483 | 0.7449 |
0.7825 |
| 6yyh-assembly1.cif.gz_A | 3 | 475 | 1 | 484 | 0.7435 |
0.7808 |
| 1px8-assembly1.cif.gz_A | 3 | 475 | 1 | 483 | 0.7433 |
0.7789 |
| 1w91-assembly1.cif.gz_A | 6 | 475 | 1 | 481 | 0.7426 |
0.7816 |
| 5u22-assembly1.cif.gz_A | 2 | 474 | 1 | 403 | 0.7361 |
0.8149 |
| 4m29-assembly1.cif.gz_A | 3 | 473 | 1 | 443 | 0.7353 |
0.7773 |
| 4ekj-assembly1.cif.gz_A | 3 | 475 | 1 | 493 | 0.7234 |
0.7561 |
| 6uqj-assembly1.cif.gz_A | 1 | 474 | 10 | 506 | 0.7162 |
0.756 |
| 5z3k-assembly1.cif.gz_A | 1 | 475 | 1 | 474 | 0.7115 |
0.7319 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P23552-F1-model_v4 | 1 | 474 | 4 | 488 | 0.7577 |
0.7832 |
| AF-Q9ZFM2-F1-model_v4 | 3 | 475 | 1 | 485 | 0.7448 |
0.7825 |
| AF-O30360-F1-model_v4 | 3 | 475 | 1 | 483 | 0.7426 |
0.7782 |
| AF-P36906-F1-model_v4 | 3 | 475 | 1 | 483 | 0.7425 |
0.7781 |
| AF-P94531-F1-model_v4 | 1 | 475 | 1 | 500 | 0.69 |
0.7281 |
| AF-Q7SFB0-F1-model_v4 | 1 | 472 | 16 | 559 | 0.6731 |
0.7473 |
| AF-Q90YK5-F1-model_v4 | 1 | 474 | 14 | 517 | 0.673 |
0.7242 |
| AF-Q71RP1-F1-model_v4 | 1 | 474 | 27 | 530 | 0.6633 |
0.7217 |
| AF-Q9MYY0-F1-model_v4 | 1 | 474 | 36 | 539 | 0.6572 |
0.7202 |
| AF-P35475-F1-model_v4 | 1 | 475 | 27 | 626 | 0.6566 |
0.7708 |