Cluster: HRGMv2_4106_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4106
- CGC Family ID: CGCFAM_02469
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4106_75 | HRGMv2_4106_75_5 | 7412 | 8371 | - | 3.A.1.1.6 |
| NULL(UNKNOWN) | HRGMv2_4106_75 | HRGMv2_4106_75_6 | 8389 | 9339 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4106_75 | HRGMv2_4106_75_7 | 9356 | 11137 | - | GH20 |
| NULL(UNKNOWN) | HRGMv2_4106_75 | HRGMv2_4106_75_8 | 11183 | 12247 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4106_75 | HRGMv2_4106_75_9 | 12248 | 13537 | - | GH109 |
Gene ID: HRGMv2_4106_75_5
Type: TC
Location: 7412 - 8371 (-)
Type: TC
Location: 7412 - 8371 (-)
Gene ID: HRGMv2_4106_75_6
Type:
Location: 8389 - 9339 (-)
Type:
Location: 8389 - 9339 (-)
Gene ID: HRGMv2_4106_75_7
Type: CAZyme
Location: 9356 - 11137 (-)
Type: CAZyme
Location: 9356 - 11137 (-)
Gene ID: HRGMv2_4106_75_8
Type:
Location: 11183 - 12247 (-)
Type:
Location: 11183 - 12247 (-)
Gene ID: HRGMv2_4106_75_9
Type: CAZyme
Location: 12248 - 13537 (-)
Type: CAZyme
Location: 12248 - 13537 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp949287815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.