PROTEIN: HRGMv2_4106_75_8
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Protein File & Metadata
Source:
HRGMv2_4106_75_8.pdb
Genome ID:
Protein ID:
HRGMv2_4106_75_8
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Protein Sequence
MKAVYYALLF ASALIFSSQF LITRAYQRRN GTGFISSVKL SLGAYFTIAV FFLIKGSITY 60 GKFDLGFSAF TFGMTLLIAL VSLSCVFMGI KVLAVGDMSI YSVFMMLGSL VLPTFVGLVF 120 YKESFGLIKG IAILLMFAAI IFSISASGKK VFNIKALICY IGIFLMNGMI GVLFTVHQNH 180 PELTALAVRN NNGSFSVNND AFMTWYGLST VILSAIVYLV IITVKAFENK KHKSKTDINS 240 CGAEIENKNE NYYQTDSECN VCGKQNALSI IKQIAIFIVL PVFYGLCNGL GDYFIAIATQ 300 PGALGSSVTF PIINGGTILF SSLFGLIFYK EKFRLATYIA LALVMASTVL FMFA 354
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DPI5-F1-model_v4 | 1 | 354 | 7 | 296 | 0.7907 |
0.8937 |
| AF-A0A0H3GYZ7-F1-model_v4 | 1 | 354 | 1 | 277 | 0.7855 |
0.8958 |
| AF-P44170-F1-model_v4 | 6 | 354 | 1 | 287 | 0.7853 |
0.8868 |
| AF-Q5F951-F1-model_v4 | 6 | 354 | 1 | 282 | 0.7842 |
0.8996 |
| AF-Q8ZL13-F1-model_v4 | 1 | 354 | 10 | 286 | 0.7741 |
0.8971 |
| AF-A0A0H3GXI1-F1-model_v4 | 1 | 354 | 3 | 281 | 0.769 |
0.8832 |
| AF-K0F565-F1-model_v4 | 3 | 354 | 1 | 287 | 0.7668 |
0.8622 |
| AF-P14182-F1-model_v4 | 3 | 354 | 1 | 287 | 0.7637 |
0.8686 |
| AF-Q32AD2-F1-model_v4 | 1 | 354 | 18 | 302 | 0.7635 |
0.8984 |
| AF-A0A0H3GRE4-F1-model_v4 | 1 | 354 | 1 | 280 | 0.7622 |
0.8933 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 354 | 373 | 665 | 0.5253 |
0.8292 |
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 354 | 446 | 767 | 0.498 |
0.7539 |
| AF-A0A7H8KSK8-F1-model_v4 | GT51 | 1 | 354 | 816 | 1110 | 0.4585 |
0.8273 |
| AF-A0A4D6KI88-F1-model_v4 | GH1 | 1 | 354 | 93 | 392 | 0.4214 |
0.7105 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 354 | 373 | 665 | 0.5253 |
0.8292 |
| A0A3P6AF83 | GH28 | 1 | 354 | 446 | 767 | 0.498 |
0.7539 |
| A0A7H8KSK8 | GT51 | 1 | 354 | 816 | 1110 | 0.4585 |
0.8273 |
| A0A4D6KI88 | GH1 | 1 | 354 | 93 | 392 | 0.4214 |
0.7105 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5i20-assembly4.cif.gz_D | 1 | 354 | 1 | 280 | 0.7908 |
0.8982 |
| 7paf-assembly1.cif.gz_D | 5 | 352 | 1 | 278 | 0.7882 |
0.8978 |
| 5i20-assembly1.cif.gz_A | 1 | 354 | 1 | 282 | 0.7808 |
0.8921 |
| 5i20-assembly3.cif.gz_C | 1 | 354 | 1 | 279 | 0.7779 |
0.89 |
| 5i20-assembly2.cif.gz_B | 1 | 354 | 1 | 277 | 0.7753 |
0.8885 |
| 5i20-assembly5.cif.gz_E | 1 | 354 | 1 | 284 | 0.7747 |
0.8858 |
| 6i1z-assembly1.cif.gz_A | 1 | 354 | 1 | 277 | 0.7454 |
0.8629 |
| 6i1r-assembly1.cif.gz_A | 1 | 354 | 1 | 302 | 0.7418 |
0.8282 |
| 6i1r-assembly1.cif.gz_B | 1 | 354 | 1 | 303 | 0.7413 |
0.8267 |
| 6i1z-assembly1.cif.gz_B | 4 | 354 | 1 | 284 | 0.7381 |
0.8466 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44170-F1-model_v4 | 6 | 354 | 1 | 287 | 0.7853 |
0.8868 |
| AF-O34416-F1-model_v4 | 2 | 354 | 1 | 286 | 0.7738 |
0.8798 |
| AF-Q08794-F1-model_v4 | 1 | 354 | 5 | 298 | 0.7711 |
0.8826 |
| AF-P14182-F1-model_v4 | 3 | 354 | 1 | 287 | 0.7637 |
0.8686 |
| AF-O29740-F1-model_v4 | 1 | 354 | 1 | 286 | 0.7619 |
0.8653 |
| AF-P39649-F1-model_v4 | 1 | 354 | 2 | 283 | 0.7618 |
0.8842 |
| AF-P37511-F1-model_v4 | 1 | 354 | 2 | 293 | 0.7598 |
0.8665 |
| AF-Q4UNE6-F1-model_v4 | 1 | 354 | 7 | 283 | 0.757 |
0.8903 |
| AF-P71356-F1-model_v4 | 1 | 354 | 1 | 299 | 0.7565 |
0.8443 |
| AF-A6WUW2-F1-model_v4 | 9 | 354 | 1 | 276 | 0.7555 |
0.8781 |