Cluster: HRGMv2_4106_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4106
- CGC Family ID: CGCFAM_07322
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4106_71 | HRGMv2_4106_71_6 | 9171 | 11003 | + | GH163 |
| TF | HRGMv2_4106_71 | HRGMv2_4106_71_7 | 11094 | 11897 | - | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_4106_71 | HRGMv2_4106_71_8 | 12037 | 13719 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4106_71 | HRGMv2_4106_71_9 | 13712 | 14632 | + | 3.A.1.1.3 |
| TC | HRGMv2_4106_71 | HRGMv2_4106_71_10 | 14645 | 15559 | + | 3.A.1.1.23 |
| NULL(UNKNOWN) | HRGMv2_4106_71 | HRGMv2_4106_71_11 | 15588 | 18602 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4106_71 | HRGMv2_4106_71_12 | 18612 | 20537 | + | GH163 |
Gene ID: HRGMv2_4106_71_6
Type: CAZyme
Location: 9171 - 11003 (+)
Type: CAZyme
Location: 9171 - 11003 (+)
Gene ID: HRGMv2_4106_71_7
Type: TF
Location: 11094 - 11897 (-)
Type: TF
Location: 11094 - 11897 (-)
Gene ID: HRGMv2_4106_71_8
Type:
Location: 12037 - 13719 (+)
Type:
Location: 12037 - 13719 (+)
Gene ID: HRGMv2_4106_71_9
Type: TC
Location: 13712 - 14632 (+)
Type: TC
Location: 13712 - 14632 (+)
Gene ID: HRGMv2_4106_71_10
Type: TC
Location: 14645 - 15559 (+)
Type: TC
Location: 14645 - 15559 (+)
Gene ID: HRGMv2_4106_71_11
Type:
Location: 15588 - 18602 (+)
Type:
Location: 15588 - 18602 (+)
Gene ID: HRGMv2_4106_71_12
Type: CAZyme
Location: 18612 - 20537 (+)
Type: CAZyme
Location: 18612 - 20537 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp949287815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.