PROTEIN: HRGMv2_4106_71_8
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Protein File & Metadata
Source:
HRGMv2_4106_71_8.pdb
Genome ID:
Protein ID:
HRGMv2_4106_71_8
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Protein Sequence
MKKTLSILLG LLLCFSMVAC KRDFGHTEKI DPKRTQLYVF NYDGGVGTEW LYDIKARFEA 60 EYKDECFEPG TDKKGVQIMI EANKNSFNAD STIQSNPNQV FFTENVPYNE LVSQNLLLEI 120 SDIVTDNSTG TSLESRMTED QQKNLTALKG KYYALPHYDG YRGLAYDVDL FEDKGLYFAA 180 EKENGNNGFI ISKTDKRSAG PDGKFDTRDD GLPSTLEEFF ELCEYMASTM SITPLIFTGM 240 YKEYTNYIIE AVFANYSGAE AVKLDYTFDS EGKEVEIITG FNELGGDDLF GATPIVEKVV 300 ITPKNGYLLK QQVGKYYGLA TLKKILSDSR YFSKTNDTVS HLDAQEAFIY SKLENKPIGM 360 LVDGSYWVNE ASGAFERSIE DYGKRAENRT FGWMPLPGVV SGEVTEENAS KNAAKDMVRS 420 YAYINGNIAG DENKVKLAKL FLSYCYKLEN LQKFTEITGS PRGLSYELTS ENKKNMSDYE 480 LSIWDMHESF EMVRQLSTSK LFMDNERDLL NNLWTSTVNN MPYSLPYNAL KGSTSAMDYF 540 NGMRISKTEW ENNYKGWFNA 560
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O53485-F1-model_v4 | 23 | 557 | 23 | 439 | 0.6737 |
0.804 |
| AF-Q8DNN7-F1-model_v4 | 25 | 560 | 26 | 437 | 0.6724 |
0.8109 |
| AF-Q7AQ51-F1-model_v4 | 25 | 557 | 25 | 445 | 0.6673 |
0.796 |
| AF-A0A133CPC5-F1-model_v4 | 32 | 556 | 33 | 423 | 0.6656 |
0.8275 |
| AF-Q9HZ48-F1-model_v4 | 31 | 554 | 21 | 420 | 0.6561 |
0.7962 |
| AF-Q9CCA3-F1-model_v4 | 25 | 554 | 22 | 463 | 0.6485 |
0.7587 |
| AF-Q32AT3-F1-model_v4 | 31 | 560 | 20 | 438 | 0.6478 |
0.7718 |
| AF-A0A0H3H458-F1-model_v4 | 31 | 559 | 20 | 437 | 0.6466 |
0.7717 |
| AF-P0AG80-F1-model_v4 | 31 | 560 | 20 | 438 | 0.646 |
0.7694 |
| AF-Q7CPK0-F1-model_v4 | 31 | 560 | 20 | 438 | 0.646 |
0.7693 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7U1BNH7 | GH10 | 31 | 560 | 27 | 745 | 0.5238 |
0.6362 |
| A0A9Q8PNJ5 | GH4 | 23 | 557 | 421 | 866 | 0.4957 |
0.7459 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7eho-assembly2.cif.gz_B | 34 | 554 | 1 | 402 | 0.7144 |
0.8437 |
| 7x0k-assembly1.cif.gz_A | 34 | 557 | 1 | 406 | 0.6959 |
0.8195 |
| 3oo6-assembly2.cif.gz_B | 34 | 556 | 2 | 390 | 0.6952 |
0.8332 |
| 5dvf-assembly2.cif.gz_B | 32 | 554 | 1 | 389 | 0.6886 |
0.8245 |
| 4zs9-assembly1.cif.gz_A | 34 | 555 | 1 | 377 | 0.685 |
0.8306 |
| 1eu8-assembly1.cif.gz_A | 30 | 556 | 1 | 407 | 0.685 |
0.807 |
| 7c0t-assembly2.cif.gz_B | 21 | 556 | 1 | 396 | 0.6832 |
0.8134 |
| 3uor-assembly2.cif.gz_B | 35 | 560 | 1 | 395 | 0.6831 |
0.8147 |
| 3vxc-assembly1.cif.gz_A | 36 | 553 | 1 | 398 | 0.6831 |
0.8118 |
| 6pql-assembly2.cif.gz_B | 32 | 555 | 1 | 384 | 0.683 |
0.8226 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9KEE7-F1-model_v4 | 24 | 556 | 33 | 445 | 0.6746 |
0.8182 |
| AF-Q9RUE8-F1-model_v4 | 31 | 558 | 19 | 420 | 0.6724 |
0.8127 |
| AF-Q92KZ7-F1-model_v4 | 31 | 554 | 19 | 414 | 0.6632 |
0.8065 |
| AF-Q2YKZ9-F1-model_v4 | 32 | 557 | 23 | 411 | 0.6585 |
0.8115 |
| AF-Q8FVX5-F1-model_v4 | 31 | 554 | 26 | 421 | 0.6581 |
0.8066 |
| AF-Q8YCE2-F1-model_v4 | 32 | 554 | 27 | 421 | 0.6579 |
0.8084 |
| AF-O06875-F1-model_v4 | 32 | 554 | 27 | 421 | 0.6579 |
0.8084 |
| AF-Q98H33-F1-model_v4 | 32 | 554 | 21 | 417 | 0.6556 |
0.7985 |
| AF-O58758-F1-model_v4 | 29 | 557 | 11 | 420 | 0.655 |
0.7767 |
| AF-P94528-F1-model_v4 | 29 | 554 | 27 | 433 | 0.6531 |
0.7926 |