Cluster: HRGMv2_4100_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4100
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4100_13 | HRGMv2_4100_13_10 | 6830 | 8179 | + | 3.D.10.1.3 |
| pfam | HRGMv2_4100_13 | HRGMv2_4100_13_11 | 8176 | 9036 | + | QRPTase_C | QRPTase_N |
| TF | HRGMv2_4100_13 | HRGMv2_4100_13_12 | 9037 | 9546 | + | HTH_11 |
| CAZyme | HRGMv2_4100_13 | HRGMv2_4100_13_13 | 10021 | 13626 | + | CE8 |
| NULL(UNKNOWN) | HRGMv2_4100_13 | HRGMv2_4100_13_14 | 13874 | 14731 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4100_13 | HRGMv2_4100_13_15 | 15422 | 18361 | + | 1.C.39.4.6 |
| CAZyme | HRGMv2_4100_13 | HRGMv2_4100_13_16 | 18365 | 22051 | + | PL9_1 |
Gene ID: HRGMv2_4100_13_10
Type: TC
Location: 6830 - 8179 (+)
Type: TC
Location: 6830 - 8179 (+)
Gene ID: HRGMv2_4100_13_11
Type: pfam
Location: 8176 - 9036 (+)
Type: pfam
Location: 8176 - 9036 (+)
Gene ID: HRGMv2_4100_13_12
Type: TF
Location: 9037 - 9546 (+)
Type: TF
Location: 9037 - 9546 (+)
Gene ID: HRGMv2_4100_13_13
Type: CAZyme
Location: 10021 - 13626 (+)
Type: CAZyme
Location: 10021 - 13626 (+)
Gene ID: HRGMv2_4100_13_14
Type:
Location: 13874 - 14731 (+)
Type:
Location: 13874 - 14731 (+)
Gene ID: HRGMv2_4100_13_15
Type: TC
Location: 15422 - 18361 (+)
Type: TC
Location: 15422 - 18361 (+)
Gene ID: HRGMv2_4100_13_16
Type: CAZyme
Location: 18365 - 22051 (+)
Type: CAZyme
Location: 18365 - 22051 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Coproplasma
Species
Coproplasma sp949282385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.