PROTEIN: HRGMv2_4100_13_14
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Protein File & Metadata
Source:
HRGMv2_4100_13_14.pdb
Genome ID:
Protein ID:
HRGMv2_4100_13_14
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Protein Sequence
MDKLSKWAKI LIAVWAIALS AIIVLVMVTF LPEDEEAEAR PFGVWWWDNR LDDTYLDFAE 60 ENGVNEIYYY ASSFNQKTTD FISSSAERGI RVYWLTGEYQ WIEDMSGLTA LLDEYFAFQR 120 QSEYTFCGIH FDIEPHQHPQ FEERRQELLT SFVRLTAELR AAYPDEFIEY DLPFWLDDEI 180 ASGGDIKPAY AHIIDNSSRV TLMSYRDSCE QIYSCAEDEI RYAESVGKKL NLGVETGASG 240 EGSSVTFYEE GAQYMNEQLN ELQGLIPSDF GIAVHHIRTW RELKN 285
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q53NL1-F1-model_v4 | 3 | 285 | 3 | 307 | 0.6193 |
0.6789 |
| AF-I1J5W9-F1-model_v4 | 17 | 285 | 1 | 288 | 0.5967 |
0.6688 |
| AF-A0A1D6N6M2-F1-model_v4 | 6 | 285 | 1 | 299 | 0.5906 |
0.6529 |
| AF-O49830-F1-model_v4 | 38 | 285 | 31 | 296 | 0.5904 |
0.7128 |
| AF-Q657I8-F1-model_v4 | 1 | 285 | 13 | 327 | 0.5869 |
0.6586 |
| AF-Q8RZ29-F1-model_v4 | 36 | 285 | 22 | 292 | 0.5861 |
0.6971 |
| AF-A0A1D6N6M0-F1-model_v4 | 34 | 285 | 21 | 291 | 0.5856 |
0.6932 |
| AF-I1JRW1-F1-model_v4 | 34 | 285 | 20 | 295 | 0.5815 |
0.6934 |
| AF-Q8LHN3-F1-model_v4 | 37 | 285 | 35 | 308 | 0.5758 |
0.7047 |
| AF-Q86JD3-F1-model_v4 | 35 | 285 | 33 | 359 | 0.5745 |
0.7424 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A250JCW1-F1-model_v4 | CBM16 | 32 | 285 | 137 | 449 | 0.6818 |
0.9389 |
| AF-A0A410WZ37-F1-model_v4 | CBM16 | 22 | 285 | 47 | 490 | 0.6576 |
0.9052 |
| AF-K9LJ24-F1-model_v4 | GH18 | 8 | 285 | 1 | 297 | 0.6522 |
0.7128 |
| AF-A0A4P7RVD9-F1-model_v4 | GH18 | 1 | 285 | 3 | 341 | 0.6248 |
0.7139 |
| AF-Q8LP01-F1-model_v4 | GH18 | 11 | 285 | 1 | 294 | 0.6186 |
0.6857 |
| AF-A0A5K0YM72-F1-model_v4 | GH18 | 5 | 285 | 15 | 316 | 0.6126 |
0.6971 |
| AF-A0A804KBS4-F1-model_v4 | GH18 | 3 | 285 | 2 | 303 | 0.6085 |
0.668 |
| AF-A0A285BIB6-F1-model_v4 | GH18 | 34 | 285 | 34 | 346 | 0.5972 |
0.7561 |
| AF-A0A1L7BFK6-F1-model_v4 | GH0 | 40 | 285 | 23 | 283 | 0.5952 |
0.7102 |
| AF-C9RAU1-F1-model_v4 | GH18 | 34 | 285 | 36 | 348 | 0.5928 |
0.7543 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A250JCW1 | CBM16 | 32 | 285 | 137 | 449 | 0.6818 |
0.9389 |
| A0A410WZ37 | CBM16 | 22 | 285 | 47 | 490 | 0.6576 |
0.9052 |
| O32258 | GH18 | 9 | 285 | 1 | 338 | 0.6342 |
0.7319 |
| QRG70373.1 | GH18 | 30 | 285 | 34 | 347 | 0.6 |
0.7444 |
| C9RAU1 | GH18 | 34 | 285 | 36 | 348 | 0.5928 |
0.7543 |
| A0A5P8XME4 | GH18 | 36 | 285 | 9 | 315 | 0.59 |
0.7269 |
| A0A9X8ERS2 | GH113 | 37 | 285 | 44 | 351 | 0.5894 |
0.761 |
| A0A3E0A314 | GH18 | 37 | 285 | 31 | 351 | 0.5859 |
0.7548 |
| A0A5K1JX71 | GH18 | 33 | 285 | 33 | 334 | 0.5842 |
0.7271 |
| A0A6B9VCC1 | GH18 | 9 | 285 | 1 | 293 | 0.5805 |
0.6684 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5tcb-assembly1.cif.gz_A | 38 | 281 | 1 | 248 | 0.5979 |
0.6791 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O32258-F1-model_v4 | 9 | 285 | 1 | 338 | 0.635 |
0.7325 |
| AF-P36910-F1-model_v4 | 14 | 285 | 1 | 288 | 0.6215 |
0.6857 |
| AF-P23432-F1-model_v4 | 7 | 285 | 1 | 342 | 0.6149 |
0.7158 |
| AF-Q7KWW8-F1-model_v4 | 36 | 285 | 36 | 359 | 0.5588 |
0.7272 |