Cluster: HRGMv2_4064_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4064
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4064_8 | HRGMv2_4064_8_27 | 28922 | 29752 | - | 9.B.18.1.2 |
| pfam | HRGMv2_4064_8 | HRGMv2_4064_8_28 | 30076 | 30615 | - | Macro |
| pfam | HRGMv2_4064_8 | HRGMv2_4064_8_29 | 30649 | 31410 | - | ATP_bind_3 |
| CAZyme | HRGMv2_4064_8 | HRGMv2_4064_8_30 | 31537 | 34485 | - | GH3 |
Gene ID: HRGMv2_4064_8_27
Type: TC
Location: 28922 - 29752 (-)
Type: TC
Location: 28922 - 29752 (-)
Gene ID: HRGMv2_4064_8_28
Type: pfam
Location: 30076 - 30615 (-)
Type: pfam
Location: 30076 - 30615 (-)
Gene ID: HRGMv2_4064_8_29
Type: pfam
Location: 30649 - 31410 (-)
Type: pfam
Location: 30649 - 31410 (-)
Gene ID: HRGMv2_4064_8_30
Type: CAZyme
Location: 31537 - 34485 (-)
Type: CAZyme
Location: 31537 - 34485 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp949292715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.