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Cluster: HRGMv2_4062_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4062_12 HRGMv2_4062_12_13 7986 8915 + GH43_32
pfam HRGMv2_4062_12 HRGMv2_4062_12_14 8929 9921 + GFO_IDH_MocA | GFO_IDH_MocA_C3
pfam HRGMv2_4062_12 HRGMv2_4062_12_15 9961 10941 + ADH_zinc_N | ADH_N | ADH_zinc_N_2
TC HRGMv2_4062_12 HRGMv2_4062_12_16 10951 11952 + 2.A.69.4.5
pfam HRGMv2_4062_12 HRGMv2_4062_12_17 11984 13948 + Flg_new_2
CAZyme HRGMv2_4062_12 HRGMv2_4062_12_18 13966 15645 + GH43
NULL(UNKNOWN) HRGMv2_4062_12 HRGMv2_4062_12_19 15642 17093 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4062_12 HRGMv2_4062_12_20 17165 19045 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4062_12 HRGMv2_4062_12_21 19057 19998 + 3.A.1.1.11
TC HRGMv2_4062_12 HRGMv2_4062_12_22 19985 20836 + 3.A.1.1.34
Gene ID: HRGMv2_4062_12_13
Type: CAZyme
Location: 7986 - 8915 (+)
Gene ID: HRGMv2_4062_12_14
Type: pfam
Location: 8929 - 9921 (+)
Gene ID: HRGMv2_4062_12_15
Type: pfam
Location: 9961 - 10941 (+)
Gene ID: HRGMv2_4062_12_16
Type: TC
Location: 10951 - 11952 (+)
Gene ID: HRGMv2_4062_12_17
Type: pfam
Location: 11984 - 13948 (+)
Gene ID: HRGMv2_4062_12_18
Type: CAZyme
Location: 13966 - 15645 (+)
Gene ID: HRGMv2_4062_12_19
Type:
Location: 15642 - 17093 (+)
Gene ID: HRGMv2_4062_12_20
Type:
Location: 17165 - 19045 (+)
Gene ID: HRGMv2_4062_12_21
Type: TC
Location: 19057 - 19998 (+)
Gene ID: HRGMv2_4062_12_22
Type: TC
Location: 19985 - 20836 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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