Cluster: HRGMv2_4061_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4061
- CGC Family ID: CGCFAM_00093
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4061_77 | HRGMv2_4061_77_1 | 2 | 928 | - | GH3 |
| TC | HRGMv2_4061_77 | HRGMv2_4061_77_2 | 935 | 1804 | - | 3.A.1.1.10 |
| TC | HRGMv2_4061_77 | HRGMv2_4061_77_3 | 1856 | 2830 | - | 3.A.1.1.10 |
| NULL(UNKNOWN) | HRGMv2_4061_77 | HRGMv2_4061_77_4 | 2918 | 4246 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4061_77 | HRGMv2_4061_77_5 | 4266 | 6023 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4061_77 | HRGMv2_4061_77_6 | 6193 | 8925 | - | CBM67 | GH78 |
Gene ID: HRGMv2_4061_77_1
Type: CAZyme
Location: 2 - 928 (-)
Type: CAZyme
Location: 2 - 928 (-)
Gene ID: HRGMv2_4061_77_2
Type: TC
Location: 935 - 1804 (-)
Type: TC
Location: 935 - 1804 (-)
Gene ID: HRGMv2_4061_77_3
Type: TC
Location: 1856 - 2830 (-)
Type: TC
Location: 1856 - 2830 (-)
Gene ID: HRGMv2_4061_77_4
Type:
Location: 2918 - 4246 (-)
Type:
Location: 2918 - 4246 (-)
Gene ID: HRGMv2_4061_77_5
Type:
Location: 4266 - 6023 (-)
Type:
Location: 4266 - 6023 (-)
Gene ID: HRGMv2_4061_77_6
Type: CAZyme
Location: 6193 - 8925 (-)
Type: CAZyme
Location: 6193 - 8925 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp934277845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.