dbCAN Logo

PROTEIN: HRGMv2_4061_77_5

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_4061_77_5.pdb
Genome ID:
HRGMv2_4061
Protein ID:
HRGMv2_4061_77_5

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKKLFKRIFV   LMTCVLLTFG   TFEMLTGCKT   KSDPDTFTIW   VGSSVNSSFY   NNYGKNPVMQ 60
YLQKKFDIKL   EFITPIVGKE   LDDFNKLIGS   GSYPDMMDLS   FYTDVLSNLY   DGGYGAAMDL 120
TKYIADYMPN   YSKFMRDNAE   LTKYAKVDGK   YLTINNYNEA   IPAQWGGFMY   RRDWLVKYDG 180
NAETPDADGN   YKDGVKFPDG   YLDENGYDNP   LTIADWEYMF   GVFKKCPDYK   YAVSLPNIGY 240
HGTGDILGAF   GTGVLWNLYD   SRTEGVYDMV   RFGATSDGFR   RYVETMNKWY   REGWLDPNFT 300
STSGDMFYAL   DGDSITSGKV   GLWYGTIGQV   GDLIARASAE   TVPALNGIDA   WAARQPKETA 360
TSADPTVFYL   DGQETVRRWI   ITDAAKDKNL   EKLFSMLDWM   YSEDGAIAKY   YGLSAEQWSE 420
YDIDKSLMTK   YALTEGAYWW   VNAEGEKVAA   GTEGAMVKMN   PVVVNSTGDL   AVATNGQYFF 480
GLGYDDQTKA   FNQQSDRKRH   AYREWSAYNN   YGTVRNSLLS   QMTSSEGKNY   NATQEKIREY 540
LGTNLPDLIK   KGVTDAKWNS   YLGALRTRGC   DDNTTVLQTV   VDRVK 585
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 8 585 8 501 0.7283 0.8114
AF-A0A133D019-F1-model_v4 16 585 25 485 0.6744 0.787
AF-Q7AQ51-F1-model_v4 1 577 4 445 0.6248 0.7299
AF-Q8DNU8-F1-model_v4 32 577 38 440 0.6229 0.7833
AF-O53485-F1-model_v4 12 577 20 439 0.6229 0.7548
AF-A0A133CDW9-F1-model_v4 1 579 1 444 0.6216 0.7216
AF-K0F8J3-F1-model_v4 14 576 18 434 0.6163 0.7492
AF-K0F7X1-F1-model_v4 14 576 11 409 0.6136 0.7526
AF-Q8DNN7-F1-model_v4 16 580 25 437 0.6076 0.7452
AF-P76042-F1-model_v4 33 576 26 430 0.6062 0.7492
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 31 585 38 505 0.6857 0.8058
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 577 5 797 0.4866 0.5772
A0A9Q8PNJ5 GH4 5 577 109 866 0.4767 0.5857
AF-A0A7U1BNH7-F1-model_v4 GH10 31 583 26 745 0.473 0.5671
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 31 585 38 505 0.6857 0.8058
K8EJG7 CBM50 , CE4 30 579 30 416 0.592 0.7515
A0A1Q2TKJ3 GH49 1 577 5 797 0.4866 0.5772
A0A9Q8PNJ5 GH4 5 577 109 866 0.4767 0.5857
A0A7U1BNH7 GH10 31 583 26 745 0.473 0.5671
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3omb-assembly1.cif.gz_A 29 585 1 503 0.7536 0.8233
6fth-assembly1.cif.gz_A 32 585 1 495 0.7533 0.8293
5g5y-assembly1.cif.gz_A 33 585 2 491 0.7441 0.8271
5xs8-assembly1.cif.gz_A 33 581 1 474 0.7392 0.8302
5g62-assembly2.cif.gz_B 35 585 1 490 0.7325 0.813
6jhx-assembly2.cif.gz_B 33 585 9 483 0.724 0.8201
5h6u-assembly1.cif.gz_A 33 585 6 487 0.7231 0.8119
4tqu-assembly1.cif.gz_Q 33 585 9 490 0.7215 0.8138
3vlw-assembly2.cif.gz_B 33 585 8 489 0.7212 0.8111
5suo-assembly1.cif.gz_A 33 585 1 450 0.6794 0.7838
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 25 585 25 535 0.7333 0.8161
AF-P37966-F1-model_v4 31 585 32 502 0.7132 0.8285
AF-Q795R2-F1-model_v4 34 585 40 498 0.6795 0.806
AF-Q8FVS7-F1-model_v4 31 576 21 411 0.6356 0.793
AF-Q578M8-F1-model_v4 31 576 21 411 0.6347 0.792
AF-Q2YKZ9-F1-model_v4 31 576 21 411 0.6325 0.7895
AF-P76042-F1-model_v4 33 576 26 430 0.6062 0.7492
AF-P29822-F1-model_v4 32 576 25 422 0.6023 0.7496
AF-O06989-F1-model_v4 23 579 22 416 0.6017 0.75
AF-Q53684-F1-model_v4 29 576 22 423 0.6013 0.7652
Download Full SwissProt Results