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Cluster: HRGMv2_4054_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4054_39 HRGMv2_4054_39_1 423 2609 - GH36
CAZyme HRGMv2_4054_39 HRGMv2_4054_39_2 2756 4759 - GH3
CAZyme HRGMv2_4054_39 HRGMv2_4054_39_3 4770 7175 - CBM67 | GH78
CAZyme HRGMv2_4054_39 HRGMv2_4054_39_4 7177 9117 - GH42
NULL(UNKNOWN) HRGMv2_4054_39 HRGMv2_4054_39_5 9296 12496 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4054_39 HRGMv2_4054_39_6 12558 13616 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4054_39 HRGMv2_4054_39_7 13629 15503 - GH43
TC HRGMv2_4054_39 HRGMv2_4054_39_8 15543 16448 - 3.A.1.1.32
TC HRGMv2_4054_39 HRGMv2_4054_39_9 16450 17415 - 3.A.1.1.20
Gene ID: HRGMv2_4054_39_1
Type: CAZyme
Location: 423 - 2609 (-)
Gene ID: HRGMv2_4054_39_2
Type: CAZyme
Location: 2756 - 4759 (-)
Gene ID: HRGMv2_4054_39_3
Type: CAZyme
Location: 4770 - 7175 (-)
Gene ID: HRGMv2_4054_39_4
Type: CAZyme
Location: 7177 - 9117 (-)
Gene ID: HRGMv2_4054_39_5
Type:
Location: 9296 - 12496 (-)
Gene ID: HRGMv2_4054_39_6
Type:
Location: 12558 - 13616 (-)
Gene ID: HRGMv2_4054_39_7
Type: CAZyme
Location: 13629 - 15503 (-)
Gene ID: HRGMv2_4054_39_8
Type: TC
Location: 15543 - 16448 (-)
Gene ID: HRGMv2_4054_39_9
Type: TC
Location: 16450 - 17415 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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