PROTEIN: HRGMv2_4054_39_6
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4054_39_6.pdb
Genome ID:
Protein ID:
HRGMv2_4054_39_6
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKKIVKRISV VLGAAAMAAC FAFAGCAGTS ENFVDGPEYS YRVTDKTDEY ILYTSGSSVV 60 VDPGIQIDGV FDESFYSGRN WLKANKIWEQ SGQTETGTLE MTTYFSETGI VVAAHIVDSR 120 AAVYSSSVAT GNQTCFSGYF AFGDATTTGD DVYEIENTAA NVFKISEFVS GGLQVMYTEE 180 NVTPVHAVRR VGDITKGECY EYYVEYFMPY ALFGRSECTS TVYFNPTMIS ATLDEYGSAI 240 ADLRTWYNFG GRQSSLYGWG KPNSGYVFDR NGFISNDLTI EEAEGGTVTE EWGYDWTITG 300 DIVNLNIAPD EGWRLAHLYV NGEDVAEDVV GSVYSFTSQG DVTIRPEFVR NA 352
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| BDD87483.1 | CBM0 | 62 | 271 | 20 | 230 | 0.5665 |
0.7583 |
| AF-A0A5B7TLL2-F1-model_v4 | CBM9 | 62 | 272 | 28 | 231 | 0.5597 |
0.7694 |
| AF-A0A347UUD5-F1-model_v4 | CBM0 | 62 | 272 | 29 | 232 | 0.5502 |
0.7596 |
| AF-A0A7T5CHL7-F1-model_v4 | CBM9 | 62 | 272 | 48 | 257 | 0.5498 |
0.7783 |
| UYQ93496.1 | CBM9 | 62 | 272 | 51 | 260 | 0.5259 |
0.7484 |
| AF-A0A7H8PNT6-F1-model_v4 | CBM0 | 62 | 272 | 51 | 257 | 0.5222 |
0.7465 |
| AF-A0A2S1QF92-F1-model_v4 | CBM0 | 62 | 272 | 53 | 264 | 0.5183 |
0.7398 |
| AF-F4B357-F1-model_v4 | CBM0 | 62 | 272 | 53 | 264 | 0.518 |
0.7408 |
| AF-A0A3A9VAK7-F1-model_v4 | CBM0 | 62 | 272 | 54 | 264 | 0.5161 |
0.7368 |
| BCY18704.1 | CBM9 | 61 | 272 | 68 | 271 | 0.5114 |
0.7613 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5B7TLL2 | CBM9 | 62 | 272 | 28 | 231 | 0.5597 |
0.7694 |
| A0A2E7FMT0 | CBM9 | 62 | 272 | 42 | 248 | 0.5583 |
0.7855 |
| UYQ93496.1 | CBM9 | 62 | 272 | 51 | 260 | 0.5259 |
0.7484 |
| BCY18704.1 | CBM9 | 61 | 272 | 68 | 271 | 0.5114 |
0.7613 |
| A0A160T5F7 | CBM9 | 25 | 271 | 18 | 325 | 0.5089 |
0.6964 |
| A0A2P8GN24 | CBM9 | 62 | 339 | 41 | 327 | 0.4874 |
0.6318 |
| E8N1F2 | CBM9 | 61 | 271 | 110 | 315 | 0.4861 |
0.7722 |
| A0A496DUY4 | CBM9 | 61 | 300 | 48 | 295 | 0.473 |
0.7015 |
| A0A1Y1QQW0 | CBM9 | 25 | 272 | 309 | 819 | 0.3361 |
0.6379 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4jpq-assembly2.cif.gz_B | 61 | 271 | 12 | 218 | 0.5811 |
0.7664 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.