Cluster: HRGMv2_4050_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4050
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4050_3 | HRGMv2_4050_3_3 | 1577 | 2551 | + | 3.A.1.1.11 |
| TC | HRGMv2_4050_3 | HRGMv2_4050_3_4 | 2551 | 3414 | + | 3.A.1.1.20 |
| NULL(UNKNOWN) | HRGMv2_4050_3 | HRGMv2_4050_3_5 | 3458 | 5380 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4050_3 | HRGMv2_4050_3_6 | 5410 | 8724 | + | Big_3 |
| CAZyme | HRGMv2_4050_3 | HRGMv2_4050_3_7 | 8737 | 10395 | + | GH30_5 |
Gene ID: HRGMv2_4050_3_3
Type: TC
Location: 1577 - 2551 (+)
Type: TC
Location: 1577 - 2551 (+)
Gene ID: HRGMv2_4050_3_4
Type: TC
Location: 2551 - 3414 (+)
Type: TC
Location: 2551 - 3414 (+)
Gene ID: HRGMv2_4050_3_5
Type:
Location: 3458 - 5380 (+)
Type:
Location: 3458 - 5380 (+)
Gene ID: HRGMv2_4050_3_6
Type: pfam
Location: 5410 - 8724 (+)
Type: pfam
Location: 5410 - 8724 (+)
Gene ID: HRGMv2_4050_3_7
Type: CAZyme
Location: 8737 - 10395 (+)
Type: CAZyme
Location: 8737 - 10395 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.