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Cluster: HRGMv2_4043_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4043_5 HRGMv2_4043_5_38 41690 42715 + GT2
NULL(UNKNOWN) HRGMv2_4043_5 HRGMv2_4043_5_39 43136 43720 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4043_5 HRGMv2_4043_5_40 43870 47586 + GH3
TC HRGMv2_4043_5 HRGMv2_4043_5_41 47681 49087 + 1.C.39.4.6
CAZyme HRGMv2_4043_5 HRGMv2_4043_5_42 49258 52359 + GH3
NULL(UNKNOWN) HRGMv2_4043_5 HRGMv2_4043_5_43 52356 52814 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4043_5 HRGMv2_4043_5_44 53015 53761 + DUF2238
TC HRGMv2_4043_5 HRGMv2_4043_5_45 54322 56772 - 3.A.3.2.21
Gene ID: HRGMv2_4043_5_38
Type: CAZyme
Location: 41690 - 42715 (+)
Gene ID: HRGMv2_4043_5_39
Type:
Location: 43136 - 43720 (+)
Gene ID: HRGMv2_4043_5_40
Type: CAZyme
Location: 43870 - 47586 (+)
Gene ID: HRGMv2_4043_5_41
Type: TC
Location: 47681 - 49087 (+)
Gene ID: HRGMv2_4043_5_42
Type: CAZyme
Location: 49258 - 52359 (+)
Gene ID: HRGMv2_4043_5_43
Type:
Location: 52356 - 52814 (+)
Gene ID: HRGMv2_4043_5_44
Type: pfam
Location: 53015 - 53761 (+)
Gene ID: HRGMv2_4043_5_45
Type: TC
Location: 54322 - 56772 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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