Cluster: HRGMv2_4043_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4043
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4043_2 | HRGMv2_4043_2_7 | 8548 | 9867 | + | 2.A.66.1.32 |
| TC | HRGMv2_4043_2 | HRGMv2_4043_2_8 | 9952 | 11676 | + | 2.A.36.6.4 |
| pfam | HRGMv2_4043_2 | HRGMv2_4043_2_9 | 11733 | 12428 | - | Esterase |
| pfam | HRGMv2_4043_2 | HRGMv2_4043_2_10 | 12730 | 13149 | + | PCC |
| TC | HRGMv2_4043_2 | HRGMv2_4043_2_11 | 13220 | 14014 | + | 2.A.5.5.2 |
| pfam | HRGMv2_4043_2 | HRGMv2_4043_2_12 | 14069 | 14266 | + | FeThRed_B |
| CAZyme | HRGMv2_4043_2 | HRGMv2_4043_2_13 | 14457 | 15521 | - | GT2 |
Gene ID: HRGMv2_4043_2_7
Type: TC
Location: 8548 - 9867 (+)
Type: TC
Location: 8548 - 9867 (+)
Gene ID: HRGMv2_4043_2_8
Type: TC
Location: 9952 - 11676 (+)
Type: TC
Location: 9952 - 11676 (+)
Gene ID: HRGMv2_4043_2_9
Type: pfam
Location: 11733 - 12428 (-)
Type: pfam
Location: 11733 - 12428 (-)
Gene ID: HRGMv2_4043_2_10
Type: pfam
Location: 12730 - 13149 (+)
Type: pfam
Location: 12730 - 13149 (+)
Gene ID: HRGMv2_4043_2_11
Type: TC
Location: 13220 - 14014 (+)
Type: TC
Location: 13220 - 14014 (+)
Gene ID: HRGMv2_4043_2_12
Type: pfam
Location: 14069 - 14266 (+)
Type: pfam
Location: 14069 - 14266 (+)
Gene ID: HRGMv2_4043_2_13
Type: CAZyme
Location: 14457 - 15521 (-)
Type: CAZyme
Location: 14457 - 15521 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp900761765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.