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Cluster: HRGMv2_4043_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4043_20 HRGMv2_4043_20_1 1168 5445 + GH3
pfam HRGMv2_4043_20 HRGMv2_4043_20_2 5768 7441 + Big_3 | Flg_new | Flg_new | Flg_new
CAZyme HRGMv2_4043_20 HRGMv2_4043_20_3 7528 10587 + GH3
TF HRGMv2_4043_20 HRGMv2_4043_20_4 10721 11698 + LytTR
pfam HRGMv2_4043_20 HRGMv2_4043_20_5 11698 12999 + HATPase_c_5
CAZyme HRGMv2_4043_20 HRGMv2_4043_20_6 13133 17047 + GH3
TC HRGMv2_4043_20 HRGMv2_4043_20_7 17151 18449 + 1.C.39.4.6
CAZyme HRGMv2_4043_20 HRGMv2_4043_20_8 18462 21407 + GH3
Gene ID: HRGMv2_4043_20_1
Type: CAZyme
Location: 1168 - 5445 (+)
Gene ID: HRGMv2_4043_20_2
Type: pfam
Location: 5768 - 7441 (+)
Gene ID: HRGMv2_4043_20_3
Type: CAZyme
Location: 7528 - 10587 (+)
Gene ID: HRGMv2_4043_20_4
Type: TF
Location: 10721 - 11698 (+)
Gene ID: HRGMv2_4043_20_5
Type: pfam
Location: 11698 - 12999 (+)
Gene ID: HRGMv2_4043_20_6
Type: CAZyme
Location: 13133 - 17047 (+)
Gene ID: HRGMv2_4043_20_7
Type: TC
Location: 17151 - 18449 (+)
Gene ID: HRGMv2_4043_20_8
Type: CAZyme
Location: 18462 - 21407 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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