Cluster: HRGMv2_4043_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4043
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4043_11 | HRGMv2_4043_11_15 | 14630 | 17794 | + | GH3 |
| pfam | HRGMv2_4043_11 | HRGMv2_4043_11_16 | 17967 | 18632 | + | Ala_racemase_N |
| pfam | HRGMv2_4043_11 | HRGMv2_4043_11_17 | 18629 | 19003 | + | SepF |
| TC | HRGMv2_4043_11 | HRGMv2_4043_11_18 | 18990 | 19556 | + | 9.B.105.1.5 |
Gene ID: HRGMv2_4043_11_15
Type: CAZyme
Location: 14630 - 17794 (+)
Type: CAZyme
Location: 14630 - 17794 (+)
Gene ID: HRGMv2_4043_11_16
Type: pfam
Location: 17967 - 18632 (+)
Type: pfam
Location: 17967 - 18632 (+)
Gene ID: HRGMv2_4043_11_17
Type: pfam
Location: 18629 - 19003 (+)
Type: pfam
Location: 18629 - 19003 (+)
Gene ID: HRGMv2_4043_11_18
Type: TC
Location: 18990 - 19556 (+)
Type: TC
Location: 18990 - 19556 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp900761765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.