Cluster: HRGMv2_4043_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4043
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4043_10 | HRGMv2_4043_10_3 | 2089 | 3066 | - | 9.B.18.1.2 |
| pfam | HRGMv2_4043_10 | HRGMv2_4043_10_4 | 3274 | 3699 | + | SecB |
| pfam | HRGMv2_4043_10 | HRGMv2_4043_10_5 | 3787 | 4230 | + | Ribosomal_L9_N | Ribosomal_L9_C |
| CAZyme | HRGMv2_4043_10 | HRGMv2_4043_10_6 | 4234 | 6540 | + | GH13_14 |
Gene ID: HRGMv2_4043_10_3
Type: TC
Location: 2089 - 3066 (-)
Type: TC
Location: 2089 - 3066 (-)
Gene ID: HRGMv2_4043_10_4
Type: pfam
Location: 3274 - 3699 (+)
Type: pfam
Location: 3274 - 3699 (+)
Gene ID: HRGMv2_4043_10_5
Type: pfam
Location: 3787 - 4230 (+)
Type: pfam
Location: 3787 - 4230 (+)
Gene ID: HRGMv2_4043_10_6
Type: CAZyme
Location: 4234 - 6540 (+)
Type: CAZyme
Location: 4234 - 6540 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp900761765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.