dbCAN Logo

Cluster: HRGMv2_4010_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4010_9 HRGMv2_4010_9_12 9452 11635 - 2.A.16.2.2
STP HRGMv2_4010_9 HRGMv2_4010_9_13 11885 12850 + CBS | CBS | SIS
pfam HRGMv2_4010_9 HRGMv2_4010_9_14 12892 15375 + CarboxypepD_reg | CarbopepD_reg_2 | DUF5686
TC HRGMv2_4010_9 HRGMv2_4010_9_15 15406 16137 + 1.B.42.1.2
peptidase HRGMv2_4010_9 HRGMv2_4010_9_16 16138 17280 - M20.UPD
CAZyme HRGMv2_4010_9 HRGMv2_4010_9_17 17578 19542 + GH20
NULL(UNKNOWN) HRGMv2_4010_9 HRGMv2_4010_9_18 19616 20845 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4010_9 HRGMv2_4010_9_19 21401 22384 + DHDPS
TC HRGMv2_4010_9 HRGMv2_4010_9_20 22386 23873 - 3.A.1.132.1
TC HRGMv2_4010_9 HRGMv2_4010_9_21 23904 24626 - 3.A.1.132.1
TC HRGMv2_4010_9 HRGMv2_4010_9_22 24633 25556 - 3.A.1.132.1
Gene ID: HRGMv2_4010_9_12
Type: TC
Location: 9452 - 11635 (-)
Gene ID: HRGMv2_4010_9_13
Type: STP
Location: 11885 - 12850 (+)
Gene ID: HRGMv2_4010_9_14
Type: pfam
Location: 12892 - 15375 (+)
Gene ID: HRGMv2_4010_9_15
Type: TC
Location: 15406 - 16137 (+)
Gene ID: HRGMv2_4010_9_16
Type: peptidase
Location: 16138 - 17280 (-)
Gene ID: HRGMv2_4010_9_17
Type: CAZyme
Location: 17578 - 19542 (+)
Gene ID: HRGMv2_4010_9_18
Type:
Location: 19616 - 20845 (+)
Gene ID: HRGMv2_4010_9_19
Type: pfam
Location: 21401 - 22384 (+)
Gene ID: HRGMv2_4010_9_20
Type: TC
Location: 22386 - 23873 (-)
Gene ID: HRGMv2_4010_9_21
Type: TC
Location: 23904 - 24626 (-)
Gene ID: HRGMv2_4010_9_22
Type: TC
Location: 24633 - 25556 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List