PROTEIN: HRGMv2_4010_9_18
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Protein File & Metadata
Source:
HRGMv2_4010_9_18.pdb
Genome ID:
Protein ID:
HRGMv2_4010_9_18
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Protein Sequence
MFYKYIYWAF FIAVCLFAHG AVFAQVEDKV YKTDYRLNAG DSKSLFVELD NISFFKDNEF 60 AGEVMEGYSL PGLWLQPKLV YQPLKNIKLE LGLHALVYSG AYKYPSMAYD DIAVWKGNQY 120 QKGSHLLPFF RAQFELGKVN LVVGNIYGGS THRLIAPLYH PELNMTADPE MGFQLLFDTR 180 AYHLDVWVNW QSYIFENDTH QEAFTVGLSS QIDFTPTDAR VHVYSPIQAT IQHRGGEQDT 240 LFTNSVQTLM NGAIGAGITW NTDCRVLKRF NVEADFVGYY QQAGKLWGYD NGIGFYAAAY 300 ADLKDFRVKA GYFYAKDFIS LFGIPYFGAA STRNKGALFD KPQTLFASAE YSRTFGKRYA 360 LGAQVDVYQS MPGKMIDANG VVSSPGNATS FSFGIFFRIN PRFLLKKWE 409
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O25734-F1-model_v4 | 42 | 404 | 24 | 427 | 0.6786 |
0.7961 |
| AF-Q47706-F1-model_v4 | 24 | 404 | 17 | 421 | 0.6113 |
0.6835 |
| AF-Q9I0X7-F1-model_v4 | 19 | 404 | 11 | 448 | 0.6049 |
0.6868 |
| AF-A0A0H3GV90-F1-model_v4 | 18 | 403 | 2 | 422 | 0.6037 |
0.6677 |
| AF-Q9I6X0-F1-model_v4 | 19 | 404 | 1 | 444 | 0.6028 |
0.6809 |
| AF-Q9HY38-F1-model_v4 | 19 | 404 | 3 | 416 | 0.6015 |
0.6613 |
| AF-Q9I6U5-F1-model_v4 | 20 | 404 | 1 | 452 | 0.5963 |
0.6816 |
| AF-Q9S4Z2-F1-model_v4 | 18 | 399 | 13 | 377 | 0.5932 |
0.6584 |
| AF-Q9I083-F1-model_v4 | 36 | 403 | 23 | 425 | 0.5928 |
0.6844 |
| AF-Q9HWS9-F1-model_v4 | 41 | 403 | 37 | 432 | 0.5882 |
0.6935 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0E1SCH0 | GH8 | 1 | 404 | 60 | 1989 | 0.3296 |
0.5573 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0E1SCH0 | GH8 | 1 | 404 | 60 | 1989 | 0.3296 |
0.5573 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6ehe-assembly1.cif.gz_A | 41 | 399 | 1 | 302 | 0.6413 |
0.753 |
| 8bym-assembly1.cif.gz_A | 41 | 399 | 12 | 321 | 0.6249 |
0.74 |
| 6ehb-assembly1.cif.gz_C | 23 | 399 | 1 | 320 | 0.6189 |
0.7127 |
| 5onu-assembly1.cif.gz_C | 23 | 400 | 1 | 320 | 0.616 |
0.7098 |
| 6ehb-assembly1.cif.gz_B | 23 | 399 | 1 | 317 | 0.6149 |
0.711 |
| 2y0h-assembly1.cif.gz_A | 42 | 404 | 1 | 361 | 0.6068 |
0.6626 |
| 5dl6-assembly1.cif.gz_A | 39 | 404 | 2 | 395 | 0.6051 |
0.6803 |
| 3sy9-assembly2.cif.gz_B | 39 | 404 | 1 | 372 | 0.6032 |
0.6608 |
| 5dl8-assembly2.cif.gz_A | 34 | 403 | 1 | 391 | 0.6007 |
0.6666 |
| 3sys-assembly2.cif.gz_B | 39 | 403 | 1 | 374 | 0.6005 |
0.6617 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q52581-F1-model_v4 | 20 | 399 | 1 | 341 | 0.6205 |
0.6964 |
| AF-P14667-F1-model_v4 | 41 | 404 | 31 | 294 | 0.6204 |
0.8094 |
| AF-P29739-F1-model_v4 | 28 | 399 | 12 | 326 | 0.6171 |
0.7265 |
| AF-Q9CNN9-F1-model_v4 | 28 | 399 | 17 | 348 | 0.6165 |
0.7139 |
| AF-P20149-F1-model_v4 | 32 | 400 | 16 | 361 | 0.6138 |
0.6982 |
| AF-O54340-F1-model_v4 | 32 | 399 | 16 | 343 | 0.6135 |
0.7131 |
| AF-Q48221-F1-model_v4 | 32 | 400 | 16 | 353 | 0.612 |
0.7044 |
| AF-Q8DBX0-F1-model_v4 | 23 | 399 | 8 | 340 | 0.6115 |
0.7 |
| AF-Q47706-F1-model_v4 | 24 | 404 | 17 | 421 | 0.6113 |
0.6835 |
| AF-Q48219-F1-model_v4 | 28 | 399 | 17 | 367 | 0.6088 |
0.6882 |