Cluster: HRGMv2_4009_CGC34
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4009
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4009_47 | HRGMv2_4009_47_9 | 10279 | 11652 | + | GH28 |
| pfam | HRGMv2_4009_47 | HRGMv2_4009_47_10 | 12589 | 13470 | - | Aldose_epim |
| STP | HRGMv2_4009_47 | HRGMv2_4009_47_11 | 13487 | 15304 | - | AAA |
| CAZyme | HRGMv2_4009_47 | HRGMv2_4009_47_12 | 15424 | 16293 | + | CE12 |
| STP | HRGMv2_4009_47 | HRGMv2_4009_47_13 | 16434 | 16748 | + | NTP_transf_2 |
| TC | HRGMv2_4009_47 | HRGMv2_4009_47_14 | 16942 | 18252 | + | 1.I.1.1.3 |
| TC | HRGMv2_4009_47 | HRGMv2_4009_47_15 | 18249 | 19694 | + | 9.B.168.1.2 |
Gene ID: HRGMv2_4009_47_9
Type: CAZyme
Location: 10279 - 11652 (+)
Type: CAZyme
Location: 10279 - 11652 (+)
Gene ID: HRGMv2_4009_47_10
Type: pfam
Location: 12589 - 13470 (-)
Type: pfam
Location: 12589 - 13470 (-)
Gene ID: HRGMv2_4009_47_11
Type: STP
Location: 13487 - 15304 (-)
Type: STP
Location: 13487 - 15304 (-)
Gene ID: HRGMv2_4009_47_12
Type: CAZyme
Location: 15424 - 16293 (+)
Type: CAZyme
Location: 15424 - 16293 (+)
Gene ID: HRGMv2_4009_47_13
Type: STP
Location: 16434 - 16748 (+)
Type: STP
Location: 16434 - 16748 (+)
Gene ID: HRGMv2_4009_47_14
Type: TC
Location: 16942 - 18252 (+)
Type: TC
Location: 16942 - 18252 (+)
Gene ID: HRGMv2_4009_47_15
Type: TC
Location: 18249 - 19694 (+)
Type: TC
Location: 18249 - 19694 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Duncaniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.