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Cluster: HRGMv2_4009_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4009_21 HRGMv2_4009_21_20 29084 30382 + 2.A.66.1.36
CAZyme HRGMv2_4009_21 HRGMv2_4009_21_21 30638 31636 - GT2
pfam HRGMv2_4009_21 HRGMv2_4009_21_22 31663 32520 - adh_short_C2
pfam HRGMv2_4009_21 HRGMv2_4009_21_23 32707 33153 + dCMP_cyt_deam_1 | MafB19-deam
TC HRGMv2_4009_21 HRGMv2_4009_21_24 33182 34807 + 9.B.174.1.1
pfam HRGMv2_4009_21 HRGMv2_4009_21_25 34839 35387 + 5-FTHF_cyc-lig
pfam HRGMv2_4009_21 HRGMv2_4009_21_26 35459 36382 + Lactamase_B | Lactamase_B_2 | Lactamase_B_2
CAZyme HRGMv2_4009_21 HRGMv2_4009_21_27 36478 37899 - CE20
CAZyme HRGMv2_4009_21 HRGMv2_4009_21_28 38121 40652 + GH3
Gene ID: HRGMv2_4009_21_20
Type: TC
Location: 29084 - 30382 (+)
Gene ID: HRGMv2_4009_21_21
Type: CAZyme
Location: 30638 - 31636 (-)
Gene ID: HRGMv2_4009_21_22
Type: pfam
Location: 31663 - 32520 (-)
Gene ID: HRGMv2_4009_21_23
Type: pfam
Location: 32707 - 33153 (+)
Gene ID: HRGMv2_4009_21_24
Type: TC
Location: 33182 - 34807 (+)
Gene ID: HRGMv2_4009_21_25
Type: pfam
Location: 34839 - 35387 (+)
Gene ID: HRGMv2_4009_21_26
Type: pfam
Location: 35459 - 36382 (+)
Gene ID: HRGMv2_4009_21_27
Type: CAZyme
Location: 36478 - 37899 (-)
Gene ID: HRGMv2_4009_21_28
Type: CAZyme
Location: 38121 - 40652 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Duncaniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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