Cluster: HRGMv2_4009_CGC11
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_4009
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4009_7 | HRGMv2_4009_7_12 | 21945 | 23678 | + | GH5_4 |
| CAZyme | HRGMv2_4009_7 | HRGMv2_4009_7_13 | 23749 | 24771 | - | GT2 |
| CAZyme | HRGMv2_4009_7 | HRGMv2_4009_7_14 | 24780 | 25901 | - | GT4 |
| CAZyme | HRGMv2_4009_7 | HRGMv2_4009_7_15 | 25912 | 26802 | - | GT2 |
| pfam | HRGMv2_4009_7 | HRGMv2_4009_7_16 | 26802 | 27896 | - | EpsG |
| CAZyme | HRGMv2_4009_7 | HRGMv2_4009_7_17 | 27911 | 28642 | - | GT32 |
| CAZyme | HRGMv2_4009_7 | HRGMv2_4009_7_18 | 28639 | 29841 | - | GT4 |
| CAZyme | HRGMv2_4009_7 | HRGMv2_4009_7_19 | 29852 | 30832 | - | GT2 |
| TC | HRGMv2_4009_7 | HRGMv2_4009_7_20 | 30829 | 33336 | - | 8.A.3.1.1 |
| pfam | HRGMv2_4009_7 | HRGMv2_4009_7_21 | 33403 | 34164 | - | Poly_export | SLBB_2 |
| TC | HRGMv2_4009_7 | HRGMv2_4009_7_22 | 34317 | 35429 | + | 3.A.1.13.2 |
Gene ID: HRGMv2_4009_7_12
Type: CAZyme
Location: 21945 - 23678 (+)
Type: CAZyme
Location: 21945 - 23678 (+)
Gene ID: HRGMv2_4009_7_13
Type: CAZyme
Location: 23749 - 24771 (-)
Type: CAZyme
Location: 23749 - 24771 (-)
Gene ID: HRGMv2_4009_7_14
Type: CAZyme
Location: 24780 - 25901 (-)
Type: CAZyme
Location: 24780 - 25901 (-)
Gene ID: HRGMv2_4009_7_15
Type: CAZyme
Location: 25912 - 26802 (-)
Type: CAZyme
Location: 25912 - 26802 (-)
Gene ID: HRGMv2_4009_7_16
Type: pfam
Location: 26802 - 27896 (-)
Type: pfam
Location: 26802 - 27896 (-)
Gene ID: HRGMv2_4009_7_17
Type: CAZyme
Location: 27911 - 28642 (-)
Type: CAZyme
Location: 27911 - 28642 (-)
Gene ID: HRGMv2_4009_7_18
Type: CAZyme
Location: 28639 - 29841 (-)
Type: CAZyme
Location: 28639 - 29841 (-)
Gene ID: HRGMv2_4009_7_19
Type: CAZyme
Location: 29852 - 30832 (-)
Type: CAZyme
Location: 29852 - 30832 (-)
Gene ID: HRGMv2_4009_7_20
Type: TC
Location: 30829 - 33336 (-)
Type: TC
Location: 30829 - 33336 (-)
Gene ID: HRGMv2_4009_7_21
Type: pfam
Location: 33403 - 34164 (-)
Type: pfam
Location: 33403 - 34164 (-)
Gene ID: HRGMv2_4009_7_22
Type: TC
Location: 34317 - 35429 (+)
Type: TC
Location: 34317 - 35429 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Duncaniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.