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Cluster: HRGMv2_4008_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4008_36 HRGMv2_4008_36_8 7619 9508 + GH25
pfam HRGMv2_4008_36 HRGMv2_4008_36_9 9645 10958 - DUF1302
pfam HRGMv2_4008_36 HRGMv2_4008_36_10 10960 11742 - DUF1329 | DUF1329 | LolA_like
TC HRGMv2_4008_36 HRGMv2_4008_36_11 11762 14146 - 2.A.6.7.7
TC HRGMv2_4008_36 HRGMv2_4008_36_12 14171 15895 - 3.A.1.135.5
TC HRGMv2_4008_36 HRGMv2_4008_36_13 15918 17672 - 3.A.1.21.1
STP HRGMv2_4008_36 HRGMv2_4008_36_14 17695 18309 - TetR_N
CAZyme HRGMv2_4008_36 HRGMv2_4008_36_15 18860 19942 + GH5_13
Gene ID: HRGMv2_4008_36_8
Type: CAZyme
Location: 7619 - 9508 (+)
Gene ID: HRGMv2_4008_36_9
Type: pfam
Location: 9645 - 10958 (-)
Gene ID: HRGMv2_4008_36_10
Type: pfam
Location: 10960 - 11742 (-)
Gene ID: HRGMv2_4008_36_11
Type: TC
Location: 11762 - 14146 (-)
Gene ID: HRGMv2_4008_36_12
Type: TC
Location: 14171 - 15895 (-)
Gene ID: HRGMv2_4008_36_13
Type: TC
Location: 15918 - 17672 (-)
Gene ID: HRGMv2_4008_36_14
Type: STP
Location: 17695 - 18309 (-)
Gene ID: HRGMv2_4008_36_15
Type: CAZyme
Location: 18860 - 19942 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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