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Cluster: HRGMv2_4008_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4008_17 HRGMv2_4008_17_24 38104 39441 - GH23
pfam HRGMv2_4008_17 HRGMv2_4008_17_25 39452 40135 - DUF5683
pfam HRGMv2_4008_17 HRGMv2_4008_17_26 40151 41059 - ParBc | HTH_ParB | ParB_dimer
TC HRGMv2_4008_17 HRGMv2_4008_17_27 41064 41828 - 8.A.3.2.3
pfam HRGMv2_4008_17 HRGMv2_4008_17_28 41940 42713 + SurE
CAZyme HRGMv2_4008_17 HRGMv2_4008_17_29 42710 43888 + GT19
pfam HRGMv2_4008_17 HRGMv2_4008_17_30 44398 45261 - CTP_transf_1
TC HRGMv2_4008_17 HRGMv2_4008_17_31 45267 47336 - 3.A.16.1.1
Gene ID: HRGMv2_4008_17_24
Type: CAZyme
Location: 38104 - 39441 (-)
Gene ID: HRGMv2_4008_17_25
Type: pfam
Location: 39452 - 40135 (-)
Gene ID: HRGMv2_4008_17_26
Type: pfam
Location: 40151 - 41059 (-)
Gene ID: HRGMv2_4008_17_27
Type: TC
Location: 41064 - 41828 (-)
Gene ID: HRGMv2_4008_17_28
Type: pfam
Location: 41940 - 42713 (+)
Gene ID: HRGMv2_4008_17_29
Type: CAZyme
Location: 42710 - 43888 (+)
Gene ID: HRGMv2_4008_17_30
Type: pfam
Location: 44398 - 45261 (-)
Gene ID: HRGMv2_4008_17_31
Type: TC
Location: 45267 - 47336 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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