dbCAN Logo

Cluster: HRGMv2_4003_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4003_1 HRGMv2_4003_1_115 156118 158262 - GH29
CAZyme HRGMv2_4003_1 HRGMv2_4003_1_116 158549 161203 - GH35
NULL(UNKNOWN) HRGMv2_4003_1 HRGMv2_4003_1_117 161318 161527 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4003_1 HRGMv2_4003_1_118 162297 164066 - 8.A.46.1.5
TC HRGMv2_4003_1 HRGMv2_4003_1_119 164318 167353 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_4003_1 HRGMv2_4003_1_120 167347 167547 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4003_1 HRGMv2_4003_1_121 167704 167877 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4003_1 HRGMv2_4003_1_122 168050 171466 + GH2
Gene ID: HRGMv2_4003_1_115
Type: CAZyme
Location: 156118 - 158262 (-)
Gene ID: HRGMv2_4003_1_116
Type: CAZyme
Location: 158549 - 161203 (-)
Gene ID: HRGMv2_4003_1_117
Type:
Location: 161318 - 161527 (+)
Gene ID: HRGMv2_4003_1_118
Type: TC
Location: 162297 - 164066 (-)
Gene ID: HRGMv2_4003_1_119
Type: TC
Location: 164318 - 167353 (-)
Gene ID: HRGMv2_4003_1_120
Type:
Location: 167347 - 167547 (-)
Gene ID: HRGMv2_4003_1_121
Type:
Location: 167704 - 167877 (+)
Gene ID: HRGMv2_4003_1_122
Type: CAZyme
Location: 168050 - 171466 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Alloprevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List