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Cluster: HRGMv2_3999_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3999_97 HRGMv2_3999_97_3 2228 3058 - 1.B.42.1.2
TC HRGMv2_3999_97 HRGMv2_3999_97_4 3376 4122 + 3.A.1.27.2
TC HRGMv2_3999_97 HRGMv2_3999_97_5 4173 5003 + 3.A.1.27.5
NULL(UNKNOWN) HRGMv2_3999_97 HRGMv2_3999_97_6 5060 6013 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3999_97 HRGMv2_3999_97_7 6078 6242 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3999_97 HRGMv2_3999_97_8 6226 7902 - CBM91 | GH43_10
NULL(UNKNOWN) HRGMv2_3999_97 HRGMv2_3999_97_9 8345 8515 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3999_97 HRGMv2_3999_97_10 8993 9517 - 2.A.37.1.1
Gene ID: HRGMv2_3999_97_3
Type: TC
Location: 2228 - 3058 (-)
Gene ID: HRGMv2_3999_97_4
Type: TC
Location: 3376 - 4122 (+)
Gene ID: HRGMv2_3999_97_5
Type: TC
Location: 4173 - 5003 (+)
Gene ID: HRGMv2_3999_97_6
Type:
Location: 5060 - 6013 (-)
Gene ID: HRGMv2_3999_97_7
Type:
Location: 6078 - 6242 (+)
Gene ID: HRGMv2_3999_97_8
Type: CAZyme
Location: 6226 - 7902 (-)
Gene ID: HRGMv2_3999_97_9
Type:
Location: 8345 - 8515 (-)
Gene ID: HRGMv2_3999_97_10
Type: TC
Location: 8993 - 9517 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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